RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 TBPL2Q6SJ96 375 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 C12orf54Q6X4T0 127 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.91□□□□□ -0.02
COL7A1-206ENST00000466591 CMTM5Q96DZ9 223 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 Q96M85 177 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 WACQ9BTA9 647 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 ANKRD19PQ9H560 264 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 MSL2Q9HCI7 577 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 MED4Q9NPJ6 270 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 GMPR2Q9P2T1 348 aaKnown RBP14.91□□□□□ -0.02
COL7A1-206ENST00000466591 ADAM18Q9Y3Q7 739 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 CACNG2Q9Y698 323 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 ENPP4Q9Y6X5 453 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 FBN3Q75N90 2809 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 TEX13CA0A0J9YWL9 993 aa14.9□□□□□ -0.02
COL7A1-206ENST00000466591 AHCYL1O43865 530 aa14.9□□□□□ -0.02
COL7A1-206ENST00000466591 NDUFB2O95178 105 aa14.9□□□□□ -0.02
COL7A1-206ENST00000466591 LMO4P61968 165 aa14.9□□□□□ -0.02
COL7A1-206ENST00000466591 KRR1Q13601 381 aaKnown RBP14.9□□□□□ -0.02
COL7A1-206ENST00000466591 TMPRSS11FQ6ZWK6 438 aa14.9□□□□□ -0.02
COL7A1-206ENST00000466591 COG8Q96MW5 612 aa14.9□□□□□ -0.02
COL7A1-206ENST00000466591 DCLRE1CQ96SD1 692 aaKnown RBP14.9□□□□□ -0.02
COL7A1-206ENST00000466591 FAM107BQ9H098 131 aa14.9□□□□□ -0.02
COL7A1-206ENST00000466591 CCDC134Q9H6E4 229 aa14.9□□□□□ -0.02
COL7A1-206ENST00000466591 NMNAT1Q9HAN9 279 aaPredicted RBP14.9□□□□□ -0.02
COL7A1-206ENST00000466591 MAN2C1Q9NTJ4 1040 aa14.9□□□□□ -0.02
COL7A1-206ENST00000466591 SAMD4AQ9UPU9 718 aaKnown RBP14.9□□□□□ -0.02
COL7A1-206ENST00000466591 A0A0A6YYJ9 748 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 PRSS37A4D1T9 235 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 ZSCAN5BA6NJL1 495 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 SOCS2O14508 198 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 FFAR1O14842 300 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 SURF4O15260 269 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 PLPP2O43688 288 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 SLC16A7O60669 478 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 KHDRBS3O75525 346 aaKnown RBP14.89□□□□□ -0.03
COL7A1-206ENST00000466591 NGFP01138 241 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 TNFRSF1AP19438 455 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 RPS6KA3P51812 740 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 AQP6Q13520 282 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 ENDOGQ14249 297 aaKnown RBP14.89□□□□□ -0.03
COL7A1-206ENST00000466591 GPR139Q6DWJ6 353 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 DNM1P34Q6PK57 102 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 BPIFB2Q8N4F0 458 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 LRRC75AQ8NAA5 344 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 OR2Z1Q8NG97 314 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 RASD2Q96D21 266 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 JMJD8Q96S16 334 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 NSRP1Q9H0G5 558 aaKnown RBP14.89□□□□□ -0.03
COL7A1-206ENST00000466591 SPAG4Q9NPE6 437 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 EGFL7Q9UHF1 273 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 STAB1Q9NY15 2570 aa14.89□□□□□ -0.03
COL7A1-206ENST00000466591 LOC105371242A0A075B767 164 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 CDC42EP2O14613 210 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 IGHV2-5P01817 119 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 SBK2P0C263 348 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 COX5BP10606 129 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 EPHA1P21709 976 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 TUBG1P23258 451 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 SDHAP31040 664 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 MMP15P51511 669 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 PSME3P61289 254 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 MESTQ5EB52 335 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 HACD2Q6Y1H2 254 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 FOXL2NBQ6ZUU3 175 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 GLB1L2Q8IW92 636 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 KLHL36Q8N4N3 616 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 OR5L1Q8NGL2 311 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 OR52J3Q8NH60 311 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 NANPQ8TBE9 248 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 MCUR1Q96AQ8 359 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 RSRC1Q96IZ7 334 aaKnown RBP14.88□□□□□ -0.03
COL7A1-206ENST00000466591 SYT4Q9H2B2 425 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 TUBG2Q9NRH3 451 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 ASH2LQ9UBL3 628 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 V9GYQ6 96 aa14.88□□□□□ -0.03
COL7A1-206ENST00000466591 TRIM77I1YAP6 450 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 J3QLI3 93 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 RHCEP18577 417 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 LCN2P80188 198 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 GLYATQ6IB77 296 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 ADCK1Q86TW2 530 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 JAZF1Q86VZ6 243 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 SPICQ8N5J4 248 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 ATG16L2Q8NAA4 619 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 SLC7A13Q8TCU3 470 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 ELAC2Q9BQ52 826 aaKnown RBP14.87□□□□□ -0.03
COL7A1-206ENST00000466591 C7orf69Q9H7B7 122 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 TBCCD1Q9NVR7 557 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 IL20RAQ9UHF4 553 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 COA3Q9Y2R0 106 aaPredicted RBP14.87□□□□□ -0.03
COL7A1-206ENST00000466591 IER3IP1Q9Y5U9 82 aa14.87□□□□□ -0.03
COL7A1-206ENST00000466591 UNC119BA6NIH7 251 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 FOXH1O75593 365 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 CTLA4P16410 223 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 FUT4P22083 530 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 GATA3P23771 443 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 NOS3P29474 1203 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 SMIM11AP58511 58 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 SPIBQ01892 262 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms