RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 OR12D3Q9UGF7 316 aa1.09□□□□□ -2.23
NUCKS1-202ENST00000464938 PITPNC1Q9UKF7 332 aa1.09□□□□□ -2.23
NUCKS1-202ENST00000464938 YTHDF2Q9Y5A9 579 aaKnown RBP1.09□□□□□ -2.23
NUCKS1-202ENST00000464938 TET2Q6N021 2002 aaPredicted RBP1.09□□□□□ -2.24
NUCKS1-202ENST00000464938 PIKFYVEQ9Y2I7 2098 aa1.09□□□□□ -2.24
NUCKS1-202ENST00000464938 MROH7-TTC4A0A0A0MT08 1334 aa1.09□□□□□ -2.24
NUCKS1-202ENST00000464938 MYO10Q9HD67 2058 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 HMCN1Q96RW7 5635 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 IGLV4-60A0A075B6I1 120 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 IGKV2-28A0A075B6P5 120 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 KCNE1BA0A087WTH5 132 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 CIB4A0PJX0 185 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 SMCO3A2RU48 225 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 A6NDN8 102 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 LYRM9A8MSI8 78 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 K7EMT4 169 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 AIM2O14862 343 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 PPP1R2P9O14990 202 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 BET1O15155 118 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 EIF3HO15372 352 aaKnown RBP eCLIP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 NUPL2O15504 423 aaKnown RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 CDH16O75309 829 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 WBP4O75554 376 aaKnown RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 CTDNEP1O95476 244 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 H6PDO95479 791 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 OXTP01178 125 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 IGKV2D-28P01615 120 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 HLA-DPB1P04440 258 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 FABP3P05413 133 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 ANXA5P08758 320 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 UBTFL6P0CB48 400 aaPredicted RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 MUC1P15941 1255 aaPredicted RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 CTRB1P17538 263 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 F2RP25116 425 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 RRM2P31350 389 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 PMELP40967 661 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 SYKP43405 635 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 CSNK1EP49674 416 aaKnown RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 RAB9AP51151 201 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 PRRX1P54821 245 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 RGS8P57771 180 aaPredicted RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 STXBP1P61764 594 aaKnown RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 RPS15P62841 145 aaKnown RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 ARG2P78540 354 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 SEMG2Q02383 582 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 LIPEQ05469 1076 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 TCP10Q12799 353 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 ERCC8Q13216 396 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 MAB21L1Q13394 359 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 CUL2Q13617 745 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 GINS1Q14691 196 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 IRF4Q15306 451 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 RGNQ15493 299 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 STK11Q15831 433 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 ZSCAN26Q16670 478 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 CHRFAM7AQ494W8 412 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 SOHLH1Q5JUK2 328 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 SPANXN2Q5MJ10 180 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 PPM1LQ5SGD2 360 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 AVPI1Q5T686 147 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 PLET1Q6UQ28 207 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 NCCRP1Q6ZVX7 275 aaPredicted RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 BZW1Q7L1Q6 419 aaKnown RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 SLC16A14Q7RTX9 510 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 OAFQ86UD1 273 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 ZFP41Q8N8Y5 198 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 OR10AD1Q8NGE0 317 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 ESR2Q92731 530 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 MCUR1Q96AQ8 359 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 NARS2Q96I59 477 aaKnown RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 DNAJC1Q96KC8 554 aaKnown RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 PANX1Q96RD7 426 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 SPIN2AQ99865 258 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 SPIN2BQ9BPZ2 258 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 NDFIP1Q9BT67 221 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 SCRT1Q9BWW7 348 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 GEMIN7Q9H840 131 aaKnown RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 KCNJ16Q9NPI9 418 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 TMEM9BQ9NQ34 198 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 ZNF355PQ9NSJ1 428 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 HRASLS2Q9NWW9 162 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 CCDC59Q9P031 241 aaKnown RBP1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 UVRAGQ9P2Y5 699 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 ZNF222Q9UK12 451 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 TMED5Q9Y3A6 229 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 RFNGQ9Y644 331 aa1.08□□□□□ -2.24
NUCKS1-202ENST00000464938 NCBP2LA6PVI3 153 aaKnown RBP1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 BPY2O14599 106 aa1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 MAGEB4O15481 346 aaPredicted RBP1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 FKBP6O75344 327 aa1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 GABARAPO95166 117 aa1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 CD160O95971 181 aa1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 MRPL3P09001 348 aaKnown RBP1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 ACSM4P0C7M7 580 aa1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 CALM1P0DP23 149 aa1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 CALM2P0DP24 149 aa1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 CALM3P0DP25 149 aa1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 MYL2P10916 166 aa1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 WARSP23381 471 aaKnown RBP1.07□□□□□ -2.24
NUCKS1-202ENST00000464938 STOMP27105 288 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms