RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 Q96MF0 132 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 TMUB1Q9BVT8 246 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 PRRG3Q9BZD7 231 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 NUAK2Q9H093 628 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 RIBC2Q9H4K1 309 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 EMC7Q9NPA0 242 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 COA3Q9Y2R0 106 aaPredicted RBP14.72□□□□□ -0.05
VPS52-215ENST00000464425 RTTNQ86VV8 2226 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 ACANP16112 2415 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 IQCMA0A1B0GVH7 501 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 KHDRBS3O75525 346 aaKnown RBP14.71□□□□□ -0.05
VPS52-215ENST00000464425 IGHV4-39P01824 125 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 ZNF3P17036 446 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 MSR1P21757 451 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 CENPAP49450 140 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 SLC25A1P53007 311 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 EFNB1P98172 346 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 SWI5Q1ZZU3 235 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 C12orf73Q69YU5 71 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 PRSS57Q6UWY2 283 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 FOXL2NBQ6ZUU3 175 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 OR6V1Q8N148 313 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 PAQR4Q8N4S7 273 aaPredicted RBP14.71□□□□□ -0.05
VPS52-215ENST00000464425 CPEB3Q8NE35 698 aaKnown RBP14.71□□□□□ -0.05
VPS52-215ENST00000464425 SDR9C7Q8NEX9 313 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 AKR7LQ8NHP1 331 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 HRASLS5Q96KN8 279 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 TSSK2Q96PF2 358 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 NMNAT2Q9BZQ4 307 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 TOR3AQ9H497 397 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 POLE4Q9NR33 117 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 SMPD3Q9NY59 655 aaPredicted RBP14.71□□□□□ -0.05
VPS52-215ENST00000464425 B9D1Q9UPM9 204 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 SPEF1Q9Y4P9 236 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 FKBP7Q9Y680 259 aa14.71□□□□□ -0.05
VPS52-215ENST00000464425 VSTM5A8MXK1 200 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 GPRIN2O60269 458 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 MPZL1O95297 269 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 SNAP29O95721 258 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 GPANK1O95872 356 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 PTHP01270 115 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 CST2P09228 141 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 BMP4P12644 408 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 APEX1P27695 318 aaKnown RBP14.7□□□□□ -0.06
VPS52-215ENST00000464425 PSG4Q00888 419 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 CRMP1Q14194 572 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 ENDOGQ14249 297 aaKnown RBP14.7□□□□□ -0.06
VPS52-215ENST00000464425 SNAPC1Q16533 368 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 GALNT4Q8N4A0 578 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 PLEKHA8Q96JA3 519 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 ZNF416Q9BWM5 594 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 OR2H1Q9GZK4 316 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 RACGAP1Q9H0H5 632 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 VCXQ9H320 206 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 OR51B6Q9H340 312 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 FN3KQ9H479 309 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 ZNF442Q9H7R0 627 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 CDH20Q9HBT6 801 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 SRA1Q9HD15 236 aaKnown RBP14.7□□□□□ -0.06
VPS52-215ENST00000464425 RPRD1BQ9NQG5 326 aaKnown RBP14.7□□□□□ -0.06
VPS52-215ENST00000464425 TVP23BQ9NYZ1 205 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 TIMM10BQ9Y5J6 103 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 PMF1-BGLAPU3KQ54 211 aa14.7□□□□□ -0.06
VPS52-215ENST00000464425 ZNF469Q96JG9 3925 aaPredicted RBP14.7□□□□□ -0.06
VPS52-215ENST00000464425 IGLV1-36A0A0B4J1U3 117 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 TRIM64A6NGJ6 449 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 TRIM64BA6NI03 449 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 B9A039 149 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 DCTN6O00399 190 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 DLGAP1O14490 977 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 SLC16A6O15403 523 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 FAM157BP0CG42 384 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 PAICSP22234 425 aaKnown RBP14.69□□□□□ -0.06
VPS52-215ENST00000464425 CCNOP22674 350 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 APLNRP35414 380 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 PCBD1P61457 104 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 SNRPD2P62316 118 aaKnown RBP14.69□□□□□ -0.06
VPS52-215ENST00000464425 RAB35Q15286 201 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 TBC1D28Q2M2D7 210 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 ZIK1Q3SY52 487 aaPredicted RBP14.69□□□□□ -0.06
VPS52-215ENST00000464425 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.69□□□□□ -0.06
VPS52-215ENST00000464425 GLB1L2Q8IW92 636 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 CYB561A3Q8NBI2 242 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 OR1J2Q8NGS2 313 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 OR2T4Q8NH00 348 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 NRG4Q8WWG1 115 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 PTP4A1Q93096 173 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 MBOAT4Q96T53 435 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 FAM118AQ9NWS6 357 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 NDRG4Q9ULP0 352 aaKnown RBP14.69□□□□□ -0.06
VPS52-215ENST00000464425 FZR1Q9UM11 496 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 CMAHPQ9Y471 501 aa14.69□□□□□ -0.06
VPS52-215ENST00000464425 C12orf71A8MTZ7 269 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 FAM171A2A8MVW0 826 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 H0YJX3 145 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 STOMP27105 288 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 GLO1Q04760 184 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 EFNB3Q15768 340 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 KCNMB1Q16558 191 aa14.68□□□□□ -0.06
VPS52-215ENST00000464425 MSMPQ1L6U9 139 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms