RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 C1orf229Q6ZS94 237 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 RRM2BQ7LG56 351 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 SLC16A14Q7RTX9 510 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 GLCCI1Q86VQ1 547 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 LRP11Q86VZ4 500 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR8D4Q8NGM9 314 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 NSMAFQ92636 917 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 YIPF5Q969M3 257 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 TMEM186Q96B77 213 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 TRIM15Q9C019 465 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR52D1Q9H346 318 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 DENND2DQ9H6A0 471 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 NARFLQ9H6Q4 476 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 METTL17Q9H7H0 456 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 VSX1Q9NZR4 365 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 AURKCQ9UQB9 309 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 POMPQ9Y244 141 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 CMAHPQ9Y471 501 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 IER3IP1Q9Y5U9 82 aa6.77□□□□□ -1.33
CDC42BPA-210ENST00000462553 DHRS12A0PJE2 317 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 AQP12BA6NM10 295 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 TNFRSF11BO00300 401 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 DCTN6O00399 190 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 GYG2O15488 501 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 GSC2O15499 205 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 KCNAB3O43448 404 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 RGS9O75916 674 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 DNAJC8O75937 253 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 KRT36O76013 467 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 RAB36O95755 333 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 SERPINA5P05154 406 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 MSMBP08118 114 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 RAP2AP10114 183 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 GAAP10253 952 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 ACHEP22303 614 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 COL8A2P25067 703 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 GLRXP35754 106 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 RPL4P36578 427 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 CDKN2AP42771 156 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 ALDH3B1P43353 468 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 EVX1P49640 407 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 HILS1P60008 231 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 LMO4P61968 165 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 TSPAN31Q12999 210 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 MAD2L1BPQ15013 274 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 RFX4Q33E94 735 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 THEM4Q5T1C6 240 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 GPR139Q6DWJ6 353 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR2T5Q6IEZ7 315 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 TMEM53Q6P2H8 277 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 UGT2A3Q6UWM9 527 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 DPY19L2P2Q6ZN68 376 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 TMEM179BQ7Z7N9 219 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 AQP12AQ8IXF9 295 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 LRRC18Q8N456 261 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR2T29Q8NH02 315 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 FNDC8Q8TC99 324 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 GNPDA2Q8TDQ7 276 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 CANT1Q8WVQ1 401 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 SLCO4A1Q96BD0 722 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 SAMD8Q96LT4 415 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 SYT3Q9BQG1 590 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 WNT5BQ9H1J7 359 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 EGLN3Q9H6Z9 239 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 SIAEQ9HAT2 523 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 LPAR2Q9HBW0 351 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 KRCC1Q9NPI7 259 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 G6PC2Q9NQR9 355 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 POLE4Q9NR33 117 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZNF275Q9NSD4 429 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 HIF1ANQ9NWT6 349 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 GRHPRQ9UBQ7 328 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 SLC7A8Q9UHI5 535 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 FZR1Q9UM11 496 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 CDH10Q9Y6N8 788 aa6.76□□□□□ -1.33
CDC42BPA-210ENST00000462553 LOC100509620A0A075B734 347 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 IGLV1-36A0A0B4J1U3 117 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 TMEM89A2RUT3 159 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 BHLHE40O14503 412 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 SOCS2O14508 198 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 ARPC3O15145 178 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 AHCYL1O43865 530 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 ENTPD5O75356 428 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 CCNB2O95067 398 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 FARS2O95363 451 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 SNAP29O95721 258 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 GPANK1O95872 356 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 GASTP01350 101 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 TFP02787 698 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 CST2P09228 141 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 NR2C1P13056 603 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 CCL2P13500 99 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 HIST1H1CP16403 213 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZNF32P17041 273 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 MSR1P21757 451 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 PCMT1P22061 227 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 LAP3P28838 519 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 SLC6A6P31641 620 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 WNT5AP41221 380 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 GPR6P46095 362 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms