RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 ATP6V0D1P61421 351 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 UBA52P62987 128 aaKnown RBP4.01□□□□□ -1.77
COPS3-204ENST00000462236 C17orf67Q0P5P2 114 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 DDX39BQ13838 428 aaKnown RBP4.01□□□□□ -1.77
COPS3-204ENST00000462236 TRIP10Q15642 601 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 ZKSCAN8Q15776 578 aaPredicted RBP4.01□□□□□ -1.77
COPS3-204ENST00000462236 STK11Q15831 433 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 IQCCQ4KMZ1 466 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 C1QTNF12Q5T7M4 302 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 LGSNQ5TDP6 509 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 HBMQ6B0K9 141 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 FCRLAQ7L513 359 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 MARCH3Q86UD3 253 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 SLC43A2Q8N370 569 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 ZNF786Q8N393 782 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 SYT14Q8NB59 555 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 Q8NFD4 153 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 OR7G2Q8NG99 324 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 KCTD4Q8WVF5 259 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 MRPL24Q96A35 216 aaKnown RBP4.01□□□□□ -1.77
COPS3-204ENST00000462236 LRRC58Q96CX6 371 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 GIMAP5Q96F15 307 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 RNF145Q96MT1 663 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 NAP1L3Q99457 506 aaPredicted RBP4.01□□□□□ -1.77
COPS3-204ENST00000462236 MED17Q9NVC6 651 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 NUDT4Q9NZJ9 180 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 CD274Q9NZQ7 290 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 TEX264Q9Y6I9 313 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 IGKV3D-15A0A087WSY6 115 aa4□□□□□ -1.77
COPS3-204ENST00000462236 TMEM129A0AVI4 362 aa4□□□□□ -1.77
COPS3-204ENST00000462236 DNALI1O14645 258 aaPredicted RBP4□□□□□ -1.77
COPS3-204ENST00000462236 CYTIPO60759 359 aa4□□□□□ -1.77
COPS3-204ENST00000462236 KERAO60938 352 aa4□□□□□ -1.77
COPS3-204ENST00000462236 KRT33AO76009 404 aa4□□□□□ -1.77
COPS3-204ENST00000462236 SLU7O95391 586 aaKnown RBP4□□□□□ -1.77
COPS3-204ENST00000462236 IGKV1D-16P01601 117 aa4□□□□□ -1.77
COPS3-204ENST00000462236 OPN1LWP04000 364 aa4□□□□□ -1.77
COPS3-204ENST00000462236 IFI6P09912 130 aa4□□□□□ -1.77
COPS3-204ENST00000462236 ELK3P41970 407 aa4□□□□□ -1.77
COPS3-204ENST00000462236 NPY4RP50391 375 aa4□□□□□ -1.77
COPS3-204ENST00000462236 ZNF83P51522 516 aa4□□□□□ -1.77
COPS3-204ENST00000462236 IDH3GP51553 393 aaPredicted RBP4□□□□□ -1.77
COPS3-204ENST00000462236 LINC01547P58512 204 aaPredicted RBP4□□□□□ -1.77
COPS3-204ENST00000462236 TRA2BP62995 288 aaKnown RBP4□□□□□ -1.77
COPS3-204ENST00000462236 ILF2Q12905 390 aaKnown RBP4□□□□□ -1.77
COPS3-204ENST00000462236 STX5Q13190 355 aa4□□□□□ -1.77
COPS3-204ENST00000462236 SCGB2A2Q13296 93 aa4□□□□□ -1.77
COPS3-204ENST00000462236 TRADDQ15628 312 aa4□□□□□ -1.77
COPS3-204ENST00000462236 GABRA6Q16445 453 aa4□□□□□ -1.77
COPS3-204ENST00000462236 SLC25A53Q5H9E4 307 aa4□□□□□ -1.77
COPS3-204ENST00000462236 SLC35D3Q5M8T2 416 aa4□□□□□ -1.77
COPS3-204ENST00000462236 C11orf88Q6PI97 169 aa4□□□□□ -1.77
COPS3-204ENST00000462236 PET117Q6UWS5 81 aa4□□□□□ -1.77
COPS3-204ENST00000462236 COMMD6Q7Z4G1 85 aa4□□□□□ -1.77
COPS3-204ENST00000462236 SVOPLQ8N434 492 aa4□□□□□ -1.77
COPS3-204ENST00000462236 ZNF383Q8NA42 475 aa4□□□□□ -1.77
COPS3-204ENST00000462236 NOA1Q8NC60 698 aaKnown RBP4□□□□□ -1.77
COPS3-204ENST00000462236 OR11H4Q8NGC9 324 aa4□□□□□ -1.77
COPS3-204ENST00000462236 OR9A2Q8NGT5 310 aa4□□□□□ -1.77
COPS3-204ENST00000462236 FAM76AQ8TAV0 307 aa4□□□□□ -1.77
COPS3-204ENST00000462236 TMEM190Q8WZ59 177 aa4□□□□□ -1.77
COPS3-204ENST00000462236 TMEM186Q96B77 213 aa4□□□□□ -1.77
COPS3-204ENST00000462236 LRRC39Q96DD0 335 aa4□□□□□ -1.77
COPS3-204ENST00000462236 THOC1Q96FV9 657 aaKnown RBP4□□□□□ -1.77
COPS3-204ENST00000462236 C1orf147Q96MC9 270 aaPredicted RBP4□□□□□ -1.77
COPS3-204ENST00000462236 ZNF300Q96RE9 604 aaPredicted RBP4□□□□□ -1.77
COPS3-204ENST00000462236 SERPINI1Q99574 410 aa4□□□□□ -1.77
COPS3-204ENST00000462236 GPR22Q99680 433 aa4□□□□□ -1.77
COPS3-204ENST00000462236 URM1Q9BTM9 101 aaKnown RBP4□□□□□ -1.77
COPS3-204ENST00000462236 SUCNR1Q9BXA5 334 aa4□□□□□ -1.77
COPS3-204ENST00000462236 MED29Q9NX70 200 aa4□□□□□ -1.77
COPS3-204ENST00000462236 OPTCQ9UBM4 332 aa4□□□□□ -1.77
COPS3-204ENST00000462236 RNF150Q9ULK6 438 aa4□□□□□ -1.77
COPS3-204ENST00000462236 RNF11Q9Y3C5 154 aa4□□□□□ -1.77
COPS3-204ENST00000462236 MMP24Q9Y5R2 645 aa4□□□□□ -1.77
COPS3-204ENST00000462236 RYR2Q92736 4967 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 TENM2Q9NT68 2774 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 CSMD3Q7Z407 3707 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 UQCRHLA0A096LP55 91 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 NPIPA5A0A0B4J1W7 369 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 A0A1W2PPK0 400 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 A0A1W2PQD3 144 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 A0A1W2PR80 420 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 E7ESA3 106 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 NPIPA7E9PJI5 369 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 ATP6V1G2-DDX39BF2Z307 99 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 UBXN8O00124 270 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 KIF2AO00139 706 aaPredicted RBP3.99□□□□□ -1.77
COPS3-204ENST00000462236 OR7A17O14581 309 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 SNX3O60493 162 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 RAD51DO75771 328 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 UTS2O95399 124 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 OXSR1O95747 527 aaPredicted RBP3.99□□□□□ -1.77
COPS3-204ENST00000462236 NPIPA8P0DM63 369 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 BMXP51813 675 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 CAPZA1P52907 286 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 LMO4P61968 165 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 SCN1BQ07699 218 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 ZNF415Q09FC8 603 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 SCARB2Q14108 478 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms