RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 OPN1LWP04000 364 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 ADRB1P08588 477 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 OCM2P0CE71 109 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 CD8BP10966 210 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 ACHEP22303 614 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 CTSSP25774 331 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 HOXC12P31275 282 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 ARR3P36575 388 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 OPRL1P41146 370 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 STARP49675 285 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 PSMA6P60900 246 aaKnown RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 LSM3P62310 102 aaKnown RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 PPP3R1P63098 170 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 PLP2Q04941 152 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 SPCS2Q15005 226 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 RAB35Q15286 201 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 SGCAQ16586 387 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 ACSM3Q53FZ2 586 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 ZMAT1Q5H9K5 638 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 CARD17Q5XLA6 110 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 C22orf42Q6IC83 251 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 TMEM53Q6P2H8 277 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 BAIAP2L2Q6UXY1 529 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 B3GLCTQ6Y288 498 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 ZNF627Q7L945 461 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 NKAIN3Q8N8D7 197 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 OR2G2Q8NGZ5 317 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 NDNFQ8TB73 568 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 C11orf40Q8WZ69 217 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 TMEM203Q969S6 136 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 FOXRED1Q96CU9 486 aaPredicted RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 FAM122AQ96E09 287 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 DNAJA3Q96EY1 480 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 WDYHV1Q96HA8 205 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 C4orf45Q96LM5 186 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 CMTM3Q96MX0 182 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 DCLRE1CQ96SD1 692 aaKnown RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 FOXB1Q99853 325 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 CENPOQ9BU64 300 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 HES7Q9BYE0 225 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 C6orf62Q9GZU0 229 aaPredicted RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 NAA50Q9GZZ1 169 aaKnown RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 DEFB127Q9H1M4 99 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 OPA3Q9H6K4 179 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 CRLF2Q9HC73 371 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 DDX28Q9NUL7 540 aaKnown RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 MRPL22Q9NWU5 206 aaKnown RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 MRM2Q9UI43 246 aaKnown RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 ST6GALNAC2Q9UJ37 374 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 GDF2Q9UK05 429 aaPredicted RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 ZMIZ1Q9ULJ6 1067 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 DHDHQ9UQ10 334 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 SF3B6Q9Y3B4 125 aaKnown RBP6.61□□□□□ -1.35
LSG1-205ENST00000461343 LRP12Q9Y561 859 aa6.61□□□□□ -1.35
LSG1-205ENST00000461343 APC2O95996 2303 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 A0A087WV48 116 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 IGHV3-15A0A0B4J1V0 119 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 A0A1B0GVI7 797 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 DHRS7CA6NNS2 312 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 NOTOA8MTQ0 251 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 ZNF814B7Z6K7 855 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 J3QW42 95 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 UPK3AO75631 287 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 SC5DO75845 299 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 RPP14O95059 124 aaKnown RBP6.6□□□□□ -1.35
LSG1-205ENST00000461343 UBL3O95164 117 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 CDRT1O95170 752 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 UCHL1P09936 223 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 COX5BP10606 129 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 WT1P19544 449 aaPredicted RBP6.6□□□□□ -1.35
LSG1-205ENST00000461343 RAB3BP20337 219 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 CALRP27797 417 aaKnown RBP6.6□□□□□ -1.35
LSG1-205ENST00000461343 MPGP29372 298 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 CD40LGP29965 261 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 RFC3P40938 356 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 SELENOPP49908 381 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 CASP6P55212 293 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 TPTEP56180 551 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 RPS25P62851 125 aaKnown RBP6.6□□□□□ -1.35
LSG1-205ENST00000461343 FOXK1P85037 733 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 FABP5Q01469 135 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 FMODQ06828 376 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 C19orf57Q0VDD7 668 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 MRPL49Q13405 166 aaKnown RBP6.6□□□□□ -1.35
LSG1-205ENST00000461343 DOC2BQ14184 412 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 ELFN2Q5R3F8 820 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 OR7E24Q6IFN5 339 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 LRFN4Q6PJG9 635 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 METAP1DQ6UB28 335 aaPredicted RBP6.6□□□□□ -1.35
LSG1-205ENST00000461343 DRAM2Q6UX65 266 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 PGAP1Q75T13 922 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 SLC16A14Q7RTX9 510 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 CDH26Q8IXH8 852 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 C1orf174Q8IYL3 243 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 FTMTQ8N4E7 242 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 ZIC4Q8N9L1 334 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 C1orf162Q8NEQ5 155 aaPredicted RBP6.6□□□□□ -1.35
LSG1-205ENST00000461343 OR6K3Q8NGY3 331 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 FNDC9Q8TBE3 224 aa6.6□□□□□ -1.35
LSG1-205ENST00000461343 ST7LQ8TDW4 575 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms