RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 GPR35Q9HC97 309 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 TMEM38BQ9NVV0 291 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 A3GALT2U3KPV4 340 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 A0A1B0GTH9 108 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 TMEM212A6NML5 194 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 OR4C45A6NMZ5 311 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 ZNF878C9JN71 531 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 WISP2O76076 250 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 CDRT1O95170 752 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 DCTDP32321 178 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 RPS11P62280 158 aaKnown RBP eCLIP21.53■■□□□ 1.04
U2AF1-204ENST00000459639 ENDOGQ14249 297 aaKnown RBP21.53■■□□□ 1.04
U2AF1-204ENST00000459639 ACSM3Q53FZ2 586 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 FAM27BQ5VT28 67 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 LINC00299Q6ZSB3 139 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 LINGO2Q7L985 606 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 OR10S1Q8NGN2 331 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 ZNF837Q96EG3 531 aaPredicted RBP21.53■■□□□ 1.04
U2AF1-204ENST00000459639 CENPMQ9NSP4 180 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 CLEC4AQ9UMR7 237 aa21.53■■□□□ 1.04
U2AF1-204ENST00000459639 FRYQ5TBA9 3013 aa21.52■■□□□ 1.04
U2AF1-204ENST00000459639 A0A087WV48 116 aa21.52■■□□□ 1.04
U2AF1-204ENST00000459639 SRSF10O75494 262 aaKnown RBP21.52■■□□□ 1.04
U2AF1-204ENST00000459639 GATBO75879 557 aaKnown RBP21.52■■□□□ 1.04
U2AF1-204ENST00000459639 ZNF404Q494X3 552 aa21.52■■□□□ 1.04
U2AF1-204ENST00000459639 TSPO2Q5TGU0 170 aa21.52■■□□□ 1.04
U2AF1-204ENST00000459639 CEACAM19Q7Z692 300 aa21.52■■□□□ 1.04
U2AF1-204ENST00000459639 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.52■■□□□ 1.04
U2AF1-204ENST00000459639 PRSS35Q8N3Z0 413 aa21.52■■□□□ 1.04
U2AF1-204ENST00000459639 OR13C5Q8NGS8 318 aa21.52■■□□□ 1.04
U2AF1-204ENST00000459639 APH1AQ96BI3 265 aa21.52■■□□□ 1.04
U2AF1-204ENST00000459639 NXF2Q9GZY0 626 aaKnown RBP21.52■■□□□ 1.04
U2AF1-204ENST00000459639 COMMD4Q9H0A8 199 aa21.52■■□□□ 1.04
U2AF1-204ENST00000459639 GLRX2Q9NS18 164 aa21.52■■□□□ 1.04
U2AF1-204ENST00000459639 R4GMQ9 66 aa21.52■■□□□ 1.04
U2AF1-204ENST00000459639 ARHGAP21Q5T5U3 1957 aa21.52■■□□□ 1.04
U2AF1-204ENST00000459639 KRT33AO76009 404 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 SDC2P34741 201 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 KIR3DL2P43630 455 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 CXADRP78310 365 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 ROR2Q01974 943 aaKnown RBP21.51■■□□□ 1.03
U2AF1-204ENST00000459639 CEACAM16Q2WEN9 425 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 WDR38Q5JTN6 314 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.51■■□□□ 1.03
U2AF1-204ENST00000459639 P4HA3Q7Z4N8 544 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 TEX19Q8NA77 164 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 MCFD2Q8NI22 146 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 PHYHIPQ92561 330 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 SLC25A46Q96AG3 418 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 FOXB1Q99853 325 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 SNTG1Q9NSN8 517 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 NCOA6Q14686 2063 aaPredicted RBP21.51■■□□□ 1.03
U2AF1-204ENST00000459639 CFAP47Q6ZTR5 3102 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 PTPRQQ9UMZ3 2332 aa21.51■■□□□ 1.03
U2AF1-204ENST00000459639 ANKRD11Q6UB99 2663 aaPredicted RBP21.5■■□□□ 1.03
U2AF1-204ENST00000459639 RPL36A-HNRNPH2H7BZ11 118 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 DVL2O14641 736 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 AGTR1P30556 359 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 PEX19P40855 299 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 MTNR1BP49286 362 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 ZNF829Q3KNS6 432 aaPredicted RBP21.5■■□□□ 1.03
U2AF1-204ENST00000459639 ZMAT1Q5H9K5 638 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 CATSPERDQ86XM0 798 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 RGP1Q92546 391 aaPredicted RBP21.5■■□□□ 1.03
U2AF1-204ENST00000459639 FAM122AQ96E09 287 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 GMPPAQ96IJ6 420 aaPredicted RBP21.5■■□□□ 1.03
U2AF1-204ENST00000459639 GPR137Q96N19 417 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 MMP27Q9H306 513 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 NIPAL2Q9H841 368 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 PNRC2Q9NPJ4 139 aaKnown RBP21.5■■□□□ 1.03
U2AF1-204ENST00000459639 SLC7A10Q9NS82 523 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 FBXL3Q9UKT7 428 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 PNPP00491 289 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 RORCP51449 518 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 HIST1H3AP68431 136 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 MFGE8Q08431 387 aaPredicted RBP21.5■■□□□ 1.03
U2AF1-204ENST00000459639 NRN1LQ496H8 165 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 HIST2H3PS2Q5TEC6 136 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 KLHL24Q6TFL4 600 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 UNQ9370/PRO34162Q6UXP9 181 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 HIST2H3AQ71DI3 136 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 GJC3Q8NFK1 279 aa21.5■■□□□ 1.03
U2AF1-204ENST00000459639 MED12LQ86YW9 2145 aa21.49■■□□□ 1.03
U2AF1-204ENST00000459639 AHRRA9YTQ3 701 aa21.49■■□□□ 1.03
U2AF1-204ENST00000459639 CASKO14936 926 aa21.49■■□□□ 1.03
U2AF1-204ENST00000459639 RER1O15258 196 aa21.49■■□□□ 1.03
U2AF1-204ENST00000459639 SS18L1O75177 396 aaPredicted RBP21.49■■□□□ 1.03
U2AF1-204ENST00000459639 CST2P09228 141 aa21.49■■□□□ 1.03
U2AF1-204ENST00000459639 CALRP27797 417 aaKnown RBP21.49■■□□□ 1.03
U2AF1-204ENST00000459639 MXD1Q05195 221 aa21.49■■□□□ 1.03
U2AF1-204ENST00000459639 FAM180AQ6UWF9 173 aa21.49■■□□□ 1.03
U2AF1-204ENST00000459639 ZNF676Q8N7Q3 588 aa21.49■■□□□ 1.03
U2AF1-204ENST00000459639 IL17RDQ8NFM7 739 aa21.49■■□□□ 1.03
U2AF1-204ENST00000459639 TRIB1Q96RU8 372 aa21.49■■□□□ 1.03
U2AF1-204ENST00000459639 ZNF587BE7ETH6 402 aa21.48■■□□□ 1.03
U2AF1-204ENST00000459639 LOC110117498-PIK3R3F6TDL0 507 aa21.48■■□□□ 1.03
U2AF1-204ENST00000459639 ARL6IP5O75915 188 aa21.48■■□□□ 1.03
U2AF1-204ENST00000459639 MYL9P24844 172 aa21.48■■□□□ 1.03
U2AF1-204ENST00000459639 MMP16P51512 607 aa21.48■■□□□ 1.03
U2AF1-204ENST00000459639 NUFIP2Q7Z417 695 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms