RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 ELOVL3Q9HB03 270 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 IL1RAPQ9NPH3 570 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 CGGBP1Q9UFW8 167 aaPredicted RBP10.27□□□□□ -0.77
USP40-210ENST00000454354 IL20RAQ9UHF4 553 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 ATPIF1Q9UII2 106 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 IER3IP1Q9Y5U9 82 aa10.27□□□□□ -0.77
USP40-210ENST00000454354 ANK2Q01484 3957 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 IMPA2O14732 288 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 ARPC3O15145 178 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 SGCEO43556 437 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 DOK2O60496 412 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 SLC16A7O60669 478 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 KHDRBS3O75525 346 aaKnown RBP10.26□□□□□ -0.77
USP40-210ENST00000454354 NGFP01138 241 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 TFP02787 698 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 GCH1P30793 250 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 MSX2P35548 267 aaPredicted RBP10.26□□□□□ -0.77
USP40-210ENST00000454354 CRYBB2P43320 205 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 GSSP48637 474 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 MNAT1P51948 309 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 PPP1CBP62140 327 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 LSM6P62312 80 aaKnown RBP10.26□□□□□ -0.77
USP40-210ENST00000454354 CCL8P80075 99 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 KCNMB1Q16558 191 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 FAM209AQ5JX71 171 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 FAM120AOSQ5T036 256 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 SPATA46Q5T0L3 261 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 ARL9Q6T311 187 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 VASH1Q7L8A9 365 aaPredicted RBP10.26□□□□□ -0.77
USP40-210ENST00000454354 GLB1L2Q8IW92 636 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 FITM2Q8N6M3 262 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 NPEPL1Q8NDH3 523 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 CLDND2Q8NHS1 167 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 ABHD4Q8TB40 342 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 SLC25A40Q8TBP6 338 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 GTF3AQ92664 365 aaKnown RBP10.26□□□□□ -0.77
USP40-210ENST00000454354 C4orf45Q96LM5 186 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 CYSLTR2Q9NS75 346 aa10.26□□□□□ -0.77
USP40-210ENST00000454354 OR6C6A6NF89 314 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 ZSCAN5BA6NJL1 495 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 SOCS2O14508 198 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 ABHD16AO95870 558 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 IGHV1-46P01743 117 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 GAAP10253 952 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 SRD5A1P18405 259 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 HNF1AP20823 631 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 ATP6V1B2P21281 511 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 TUBG1P23258 451 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 CRABP1P29762 137 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 RRM2P31350 389 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 SLC6A6P31641 620 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 LIPAP38571 399 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 CDKN2AP42771 156 aaKnown RBP10.25□□□□□ -0.77
USP40-210ENST00000454354 MAGEA2P43356 314 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 HTR5AP47898 357 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 ZNF81P51508 661 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 ARHGDIAP52565 204 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 DVL1P1P54792 670 aaPredicted RBP10.25□□□□□ -0.77
USP40-210ENST00000454354 TEKQ02763 1124 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 GLO1Q04760 184 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 CR1LQ2VPA4 569 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 RFX4Q33E94 735 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 MTX3Q5HYI7 312 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 C1orf94Q6P1W5 598 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 PGM2L1Q6PCE3 622 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 ZDHHC21Q8IVQ6 265 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 ARHGAP24Q8N264 748 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 SPATA3Q8NHX4 192 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 CCT8L2Q96SF2 557 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 NUAK2Q9H093 628 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 OR52D1Q9H346 318 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 SAP30LQ9HAJ7 183 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 TUBG2Q9NRH3 451 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 TBCCD1Q9NVR7 557 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 ACTR3BQ9P1U1 418 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 KLHL21Q9UJP4 597 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 COA3Q9Y2R0 106 aaPredicted RBP10.25□□□□□ -0.77
USP40-210ENST00000454354 FBN3Q75N90 2809 aa10.25□□□□□ -0.77
USP40-210ENST00000454354 IGLV1-36A0A0B4J1U3 117 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 IGHV1-69-2A0A0G2JMI3 117 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 PLSCR5A0PG75 271 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 B4DSR2 109 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 J3QW42 95 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 PPIHO43447 177 aaKnown RBP10.24□□□□□ -0.77
USP40-210ENST00000454354 OR10H3O60404 316 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 KRT36O76013 467 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 MPZL1O95297 269 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 PPP1R3DO95685 299 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 CD55P08174 381 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 IFNGR2P38484 337 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 HMGA2P52926 109 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 LMO4P61968 165 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 HIST1H3AP68431 136 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 MXRA7P84157 204 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 TSPAN31Q12999 210 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 CCNIQ14094 377 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 ZMAT1Q5H9K5 638 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 HIST2H3PS2Q5TEC6 136 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 PGBD2Q6P3X8 592 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 DNM1P34Q6PK57 102 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms