RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 COMMD4Q9H0A8 199 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 FBXL2Q9UKC9 423 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 NPIPA1Q9UND3 350 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 COA3Q9Y2R0 106 aaPredicted RBP9.55□□□□□ -0.88
PKP4-206ENST00000452162 CHCHD2Q9Y6H1 151 aaPredicted RBP9.55□□□□□ -0.88
PKP4-206ENST00000452162 NBASA2RRP1 2371 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 CENPBD1B2RD01 187 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 H3BML4 177 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 ATP6V1G1O75348 118 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 WNT11O96014 354 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 RAF1P04049 648 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 DDOSTP39656 456 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 MMP15P51511 669 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 CCR9P51686 369 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 AGFG1P52594 562 aaKnown RBP9.55□□□□□ -0.88
PKP4-206ENST00000452162 POU3F1Q03052 451 aaPredicted RBP9.55□□□□□ -0.88
PKP4-206ENST00000452162 GLO1Q04760 184 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 FMODQ06828 376 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 MYBPHQ13203 477 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 SLC36A2Q495M3 483 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 ATAD3CQ5T2N8 411 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 RSBN1Q5VWQ0 802 aaPredicted RBP9.55□□□□□ -0.88
PKP4-206ENST00000452162 H3F3CQ6NXT2 135 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 JMJD6Q6NYC1 403 aaPredicted RBP9.55□□□□□ -0.88
PKP4-206ENST00000452162 ESPNLQ6ZVH7 1005 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 ZNF433Q8N7K0 673 aaPredicted RBP9.55□□□□□ -0.88
PKP4-206ENST00000452162 ZNF454Q8N9F8 522 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 WDSUB1Q8N9V3 476 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 SLC26A10Q8NG04 563 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 GPR148Q8TDV2 347 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 YIPF5Q969M3 257 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 UPRTQ96BW1 309 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 ST6GAL2Q96JF0 529 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 MARVELD1Q9BSK0 173 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 ABHD6Q9BV23 337 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 TCF7L1Q9HCS4 588 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 KLHL13Q9P2N7 655 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 B3GAT1Q9P2W7 334 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 NLKQ9UBE8 527 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 CAMK2AQ9UQM7 478 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 B3GALT5Q9Y2C3 310 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 CSAG2Q9Y5P2 127 aa9.55□□□□□ -0.88
PKP4-206ENST00000452162 EML6Q6ZMW3 1958 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 GPR171O14626 319 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 MPZL1O95297 269 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 SFTPCP11686 197 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 SLC6A1P30531 599 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 BTCP35070 178 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 PITPNAQ00169 270 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 C19orf57Q0VDD7 668 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 EIF2B1Q14232 305 aaKnown RBP9.54□□□□□ -0.88
PKP4-206ENST00000452162 KCNJ8Q15842 424 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 PCK2Q16822 640 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 DNM1P34Q6PK57 102 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 CMTM4Q8IZR5 234 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 ADPRHL1Q8NDY3 354 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 OR51A4Q8NGJ6 313 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 SLC7A6Q92536 515 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 MCHR2Q969V1 340 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 C5orf34Q96MH7 638 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 SLITRK2Q9H156 845 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 SERINC1Q9NRX5 453 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 MED29Q9NX70 200 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 ZNF221Q9UK13 617 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 RABL2BQ9UNT1 228 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 ALPK2Q86TB3 2170 aa9.54□□□□□ -0.88
PKP4-206ENST00000452162 TRAV8-7A0A075B6U6 113 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 IGKV1D-43A0A0B4J1Z2 117 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 TP53I11O14683 189 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 CTDSPLO15194 276 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 GSTZ1O43708 216 aaPredicted RBP9.53□□□□□ -0.88
PKP4-206ENST00000452162 PNPP00491 289 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 F10P00742 488 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 CALCBP10092 127 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 HLA-DMAP28067 261 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 P2RY4P51582 365 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 FOXK1P85037 733 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 DGCR2P98153 550 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 MFGE8Q08431 387 aaPredicted RBP9.53□□□□□ -0.88
PKP4-206ENST00000452162 SNTA1Q13424 505 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 PLA1AQ53H76 456 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 C3orf33Q6P1S2 294 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 TMEM81Q6P7N7 255 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 KCTD18Q6PI47 426 aaPredicted RBP9.53□□□□□ -0.88
PKP4-206ENST00000452162 OR52N5Q8NH56 324 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 NTNG2Q96CW9 530 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 MRI1Q9BV20 369 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 CDCP1Q9H5V8 836 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 PLA2G3Q9NZ20 509 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 RABL2AQ9UBK7 228 aaPredicted RBP9.53□□□□□ -0.88
PKP4-206ENST00000452162 POU2F3Q9UKI9 436 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 RP1L1Q8IWN7 2480 aaPredicted RBP9.53□□□□□ -0.88
PKP4-206ENST00000452162 ARPC4-TTLL3A0A0A6YYG9 625 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 SRSF10O75494 262 aaKnown RBP9.53□□□□□ -0.88
PKP4-206ENST00000452162 C1QL1O75973 258 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 TATDN3Q17R31 274 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 TBRG1Q3YBR2 411 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 IGFL2Q6UWQ7 119 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 MDGA2Q7Z553 956 aa9.53□□□□□ -0.88
PKP4-206ENST00000452162 KRT77Q7Z794 578 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms