RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 DIRC2Q96SL1 478 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 ABCD2Q9UBJ2 740 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 POLR1DQ9Y2S0 133 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 MALRD1Q5VYJ5 2156 aa18.71■□□□□ 0.59
CPSF7-208ENST00000450000 TEX13CA0A0J9YWL9 993 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 ISPDA4D126 451 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 FAM157AC9JC47 383 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 SGCEO43556 437 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 SLC16A7O60669 478 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 KHDRBS3O75525 346 aaKnown RBP18.7■□□□□ 0.58
CPSF7-208ENST00000450000 TNFSF4P23510 183 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 SDHAP31040 664 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 ENDOGQ14249 297 aaKnown RBP18.7■□□□□ 0.58
CPSF7-208ENST00000450000 ACSM5Q6NUN0 579 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 RFPL4BQ6ZWI9 263 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 RNF148Q8N7C7 305 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 FAM156AQ8NDB6 213 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 NPEPL1Q8NDH3 523 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 OR52J3Q8NH60 311 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 GTF3AQ92664 365 aaKnown RBP18.7■□□□□ 0.58
CPSF7-208ENST00000450000 RSRC1Q96IZ7 334 aaKnown RBP18.7■□□□□ 0.58
CPSF7-208ENST00000450000 C19orf24Q9BVV8 132 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 RACGAP1Q9H0H5 632 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 ZNF665Q9H7R5 613 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 PLEK2Q9NYT0 353 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 ZDHHC8Q9ULC8 765 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 V9GYQ6 96 aa18.7■□□□□ 0.58
CPSF7-208ENST00000450000 TRAV20A0A0B4J274 112 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 UNC119BA6NIH7 251 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 WNT9BO14905 357 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 IGHV1-46P01743 117 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 COX5BP10606 129 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 FHL1Q13642 323 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 MESTQ5EB52 335 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 DNM1P34Q6PK57 102 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 RASD2Q96D21 266 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 COG8Q96MW5 612 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 GAL3ST1Q99999 423 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 METTL17Q9H7H0 456 aaPredicted RBP18.69■□□□□ 0.58
CPSF7-208ENST00000450000 DCAF13Q9NV06 445 aaKnown RBP18.69■□□□□ 0.58
CPSF7-208ENST00000450000 NDUFAF4Q9P032 175 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 IER3IP1Q9Y5U9 82 aa18.69■□□□□ 0.58
CPSF7-208ENST00000450000 FBN1P35555 2871 aaKnown RBP18.69■□□□□ 0.58
CPSF7-208ENST00000450000 SOCS2O14508 198 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 NGFP01138 241 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 TUBG1P23258 451 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 SRSF2Q01130 221 aaKnown RBP18.68■□□□□ 0.58
CPSF7-208ENST00000450000 AQP6Q13520 282 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 MTX3Q5HYI7 312 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 C1orf94Q6P1W5 598 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 DPY19L2P2Q6ZN68 376 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 ADCK1Q86TW2 530 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 GLB1L2Q8IW92 636 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 MYLK2Q9H1R3 596 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 SYT4Q9H2B2 425 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 TUBG2Q9NRH3 451 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 TBCCD1Q9NVR7 557 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 IL20RAQ9UHF4 553 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 MAGEL2Q9UJ55 1249 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 SIGLEC7Q9Y286 467 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 WIPI2Q9Y4P8 454 aa18.68■□□□□ 0.58
CPSF7-208ENST00000450000 DIRAS1O95057 198 aa18.67■□□□□ 0.58
CPSF7-208ENST00000450000 MPZL1O95297 269 aa18.67■□□□□ 0.58
CPSF7-208ENST00000450000 CTLA4P16410 223 aa18.67■□□□□ 0.58
CPSF7-208ENST00000450000 IFNGR2P38484 337 aa18.67■□□□□ 0.58
CPSF7-208ENST00000450000 MMP15P51511 669 aa18.67■□□□□ 0.58
CPSF7-208ENST00000450000 LMO4P61968 165 aa18.67■□□□□ 0.58
CPSF7-208ENST00000450000 MXRA7P84157 204 aa18.67■□□□□ 0.58
CPSF7-208ENST00000450000 TNFAIP6P98066 277 aaPredicted RBP18.67■□□□□ 0.58
CPSF7-208ENST00000450000 SPIBQ01892 262 aa18.67■□□□□ 0.58
CPSF7-208ENST00000450000 FAM122BQ7Z309 247 aa18.67■□□□□ 0.58
CPSF7-208ENST00000450000 PYURFQ96I23 114 aa18.67■□□□□ 0.58
CPSF7-208ENST00000450000 MSL2Q9HCI7 577 aa18.67■□□□□ 0.58
CPSF7-208ENST00000450000 NRIP3Q9NQ35 241 aa18.67■□□□□ 0.58
CPSF7-208ENST00000450000 COA3Q9Y2R0 106 aaPredicted RBP18.67■□□□□ 0.58
CPSF7-208ENST00000450000 TRBV4-1A0A0J9YWV2 114 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 PTP4A3O75365 173 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 GADD45GO95257 159 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 SCG5P05408 212 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 CRABP1P29762 137 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 OMPP47874 163 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 SMARCD3Q6STE5 483 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.66■□□□□ 0.58
CPSF7-208ENST00000450000 JAZF1Q86VZ6 243 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 ST7LQ8TDW4 575 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 GORASP2Q9H8Y8 452 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 UBAP1Q9NZ09 502 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 ASH2LQ9UBL3 628 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 TMCC3Q9ULS5 477 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 CACNG2Q9Y698 323 aa18.66■□□□□ 0.58
CPSF7-208ENST00000450000 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.65■□□□□ 0.581e-7■■■□□ 17.2
CPSF7-208ENST00000450000 A0A0G2JMP0 313 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 A0A0X1KG70 313 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 ZSCAN5BA6NJL1 495 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 HAX1O00165 279 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 OR10H3O60404 316 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 SNX3O60493 162 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 ICMTO60725 284 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 PNPP00491 289 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 RENP00797 406 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms