RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 TFP02787 698 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 LCKP06239 509 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 ZNF3P17036 446 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 GLRXP35754 106 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 HTR5AP47898 357 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 RIPPLY3P57055 190 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 RPS23P62266 143 aaKnown RBP13.55□□□□□ -0.24
TOP3B-211ENST00000449704 SNRPD2P62316 118 aaKnown RBP13.55□□□□□ -0.24
TOP3B-211ENST00000449704 RAB35Q15286 201 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 SWI5Q1ZZU3 235 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 SVOPLQ8N434 492 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 SLC26A10Q8NG04 563 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 POM121L2Q96KW2 1035 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 RBM4Q9BWF3 364 aaKnown RBP13.55□□□□□ -0.24
TOP3B-211ENST00000449704 CDADC1Q9BWV3 514 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 PLK3Q9H4B4 646 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 KRT84Q9NSB2 600 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 PLEK2Q9NYT0 353 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 EIF3KQ9UBQ5 218 aaKnown RBP13.55□□□□□ -0.24
TOP3B-211ENST00000449704 GDF2Q9UK05 429 aaPredicted RBP13.55□□□□□ -0.24
TOP3B-211ENST00000449704 FZR1Q9UM11 496 aa13.55□□□□□ -0.24
TOP3B-211ENST00000449704 TVP23AA6NH52 213 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 SAC3D1A6NKF1 404 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 RER1O15258 196 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 MITFO75030 526 aaPredicted RBP13.54□□□□□ -0.24
TOP3B-211ENST00000449704 NDUFS7O75251 213 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 SNAP29O95721 258 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 HMGN1P05114 100 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 GYPBP06028 91 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 ZNF823P16415 610 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 RAD52P43351 418 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 SLC25A1P53007 311 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 CRISP1P54107 249 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 UCP2P55851 309 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 EFNB3Q15768 340 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 MSMPQ1L6U9 139 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 TMEM236Q5W0B7 351 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 ZFP1Q6P2D0 407 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 CORO6Q6QEF8 472 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 TGIF2LYQ8IUE0 185 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 KRTAP1-3Q8IUG1 177 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 ZNRF4Q8WWF5 429 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 MRPL24Q96A35 216 aaKnown RBP13.54□□□□□ -0.24
TOP3B-211ENST00000449704 PLEKHA8Q96JA3 519 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 PKP2Q99959 881 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 SYT3Q9BQG1 590 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 TEX12Q9BXU0 123 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 MED20Q9H944 212 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 DUSP13Q9UII6 198 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 NDRG4Q9ULP0 352 aaKnown RBP13.54□□□□□ -0.24
TOP3B-211ENST00000449704 OAZ3Q9UMX2 235 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 ITPR3Q14573 2671 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 RTTNQ86VV8 2226 aa13.54□□□□□ -0.24
TOP3B-211ENST00000449704 FAM183AA6NL82 134 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 H3BNX3 289 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 IGHV4-39P01824 125 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 COX5BP10606 129 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 CLUP10909 449 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 SPI1P17947 270 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 PAICSP22234 425 aaKnown RBP13.53□□□□□ -0.24
TOP3B-211ENST00000449704 PCSK6P29122 969 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 WNT5AP41221 380 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 CDK5Q00535 292 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 CCDC92Q53HC0 331 aaPredicted RBP13.53□□□□□ -0.24
TOP3B-211ENST00000449704 RGS7BPQ6MZT1 257 aaPredicted RBP13.53□□□□□ -0.24
TOP3B-211ENST00000449704 PRSS57Q6UWY2 283 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 VASH1Q7L8A9 365 aaPredicted RBP13.53□□□□□ -0.24
TOP3B-211ENST00000449704 LINC00346Q8IVM7 164 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 PARP8Q8N3A8 854 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 ZNF511Q8NB15 262 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 GJC3Q8NFK1 279 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 OR6K6Q8NGW6 343 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 OR2AJ1Q8NGZ0 328 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 VRK1Q99986 396 aaPredicted RBP13.53□□□□□ -0.24
TOP3B-211ENST00000449704 MRPL37Q9BZE1 423 aaKnown RBP13.53□□□□□ -0.24
TOP3B-211ENST00000449704 NMNAT2Q9BZQ4 307 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 BCL2L14Q9BZR8 327 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 MRPL22Q9NWU5 206 aaKnown RBP13.53□□□□□ -0.24
TOP3B-211ENST00000449704 LHFPL6Q9Y693 200 aa13.53□□□□□ -0.24
TOP3B-211ENST00000449704 TMEM129A0AVI4 362 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 H7C417 338 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 SYNGR3O43761 229 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 ABHD16AO95870 558 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 FMO3P31513 532 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 RPS27P42677 84 aaKnown RBP13.52□□□□□ -0.25
TOP3B-211ENST00000449704 ERVS71-1P61550 626 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 TMEM154Q6P9G4 183 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 LYPD4Q6UWN0 246 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 LRP11Q86VZ4 500 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 OR1J1Q8NGS3 322 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 OR1F12Q8NHA8 337 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 ABHD4Q8TB40 342 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 SLC7A6Q92536 515 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 Q96MF0 132 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 PITX2Q99697 317 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 DOK1Q99704 481 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 HCAR1Q9BXC0 346 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 GABARAPL1Q9H0R8 117 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 OR51V1Q9H2C8 321 aa13.52□□□□□ -0.25
TOP3B-211ENST00000449704 BARX1Q9HBU1 254 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms