RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 GABREP78334 506 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 GUCA2AQ02747 115 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 GGTLC2Q14390 218 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 WIPI1Q5MNZ9 446 aaPredicted RBP10.88□□□□□ -0.67
CLDN4-203ENST00000435050 GALNTL5Q7Z4T8 443 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 GPR137CQ8N3F9 429 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 TMEM105Q8N8V8 129 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 ZNF454Q8N9F8 522 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.88□□□□□ -0.67
CLDN4-203ENST00000435050 GIMAP1Q8WWP7 306 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 CITED4Q96RK1 184 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 UCN2Q96RP3 112 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 JAM3Q9BX67 310 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 P4HTMQ9NXG6 502 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 STEAP1Q9UHE8 339 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 ACOT7O00154 380 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 GPR171O14626 319 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 CXCL13O43927 109 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 DCTDP32321 178 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 VEGFCP49767 419 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 SUMO3P55854 103 aaPredicted RBP10.88□□□□□ -0.67
CLDN4-203ENST00000435050 HDDC2Q7Z4H3 204 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 NOXA1Q86UR1 476 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 NFAM1Q8NET5 270 aaPredicted RBP10.88□□□□□ -0.67
CLDN4-203ENST00000435050 TIMP4Q99727 224 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 OR51J1Q9H342 316 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 PLSCR3Q9NRY6 295 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 MRPL22Q9NWU5 206 aaKnown RBP10.88□□□□□ -0.67
CLDN4-203ENST00000435050 PLA2G3Q9NZ20 509 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 UPK3AO75631 287 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 DXOO77932 396 aaKnown RBP10.88□□□□□ -0.67
CLDN4-203ENST00000435050 ANKRD34CP0C6C1 535 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 NAGAP17050 411 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 TSPAN5P62079 268 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 C2orf76Q3KRA6 126 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 PXKQ7Z7A4 578 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 LRRC75AQ8NAA5 344 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 OR51A2Q8NGJ7 313 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 PNPLA2Q96AD5 504 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 GPN1Q9HCN4 374 aaPredicted RBP10.88□□□□□ -0.67
CLDN4-203ENST00000435050 TECTAO75443 2155 aa10.88□□□□□ -0.67
CLDN4-203ENST00000435050 MS4A18H0YCH9 400 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 RAMP1O60894 148 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 GUSBP08236 651 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 ENPP1P22413 925 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 TAS2R20P59543 309 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 CSNK2A1P68400 391 aaPredicted RBP10.87□□□□□ -0.67
CLDN4-203ENST00000435050 SPEM2Q0P670 501 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 PLPPR5Q32ZL2 321 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 MS4A18Q3C1V0 323 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 SLC22A6Q4U2R8 563 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 OR2M3Q8NG83 312 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 ZNF431Q8TF32 576 aaPredicted RBP10.87□□□□□ -0.67
CLDN4-203ENST00000435050 ASB10Q8WXI3 467 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 PHYHIPQ92561 330 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 THRSPQ92748 146 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 PDCD10Q9BUL8 212 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 EDEM2Q9BV94 578 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 LRFN1Q9P244 771 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 GDF2Q9UK05 429 aaPredicted RBP10.87□□□□□ -0.67
CLDN4-203ENST00000435050 IGKV1D-43A0A0B4J1Z2 117 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 OR2M5A3KFT3 312 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 PMS2P1A4D2B8 440 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 ZNF208O43345 1280 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 CYB5AP00167 134 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 RAB40ALP0C0E4 278 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 KLK2P20151 261 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 CARD18P57730 90 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 BAIAP2L2Q6UXY1 529 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 TMPPEQ6ZT21 453 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 BPHLQ86WA6 291 aaPredicted RBP10.87□□□□□ -0.67
CLDN4-203ENST00000435050 FAM181AQ8N9Y4 354 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 RAB40AQ8WXH6 277 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 MIB2Q96AX9 1013 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 HRH3Q9Y5N1 445 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 PHF3Q92576 2039 aaKnown RBP10.87□□□□□ -0.67
CLDN4-203ENST00000435050 NR2C1P13056 603 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 KIR3DL2P43630 455 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 AP2S1P53680 142 aaPredicted RBP10.87□□□□□ -0.67
CLDN4-203ENST00000435050 CDNFQ49AH0 187 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 CD163Q86VB7 1156 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 DND1Q8IYX4 353 aaKnown RBP10.87□□□□□ -0.67
CLDN4-203ENST00000435050 HAVCR2Q8TDQ0 301 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 CT55Q8WUE5 264 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 RGP1Q92546 391 aaPredicted RBP10.87□□□□□ -0.67
CLDN4-203ENST00000435050 H3BMH7 237 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 ECDO95905 644 aaPredicted RBP10.87□□□□□ -0.67
CLDN4-203ENST00000435050 LCATP04180 440 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 AMY2AP04746 511 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 FGF5P12034 268 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 RRAS2P62070 204 aaPredicted RBP10.87□□□□□ -0.67
CLDN4-203ENST00000435050 PRSS35Q8N3Z0 413 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 RNF128Q8TEB7 428 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 SLC25A43Q8WUT9 341 aaPredicted RBP10.87□□□□□ -0.67
CLDN4-203ENST00000435050 SEC22CQ9BRL7 303 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 MGAT4CQ9UBM8 478 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 TCFL5Q9UL49 500 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 NUBP2Q9Y5Y2 271 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 R4GMQ9 66 aa10.87□□□□□ -0.67
CLDN4-203ENST00000435050 TNFSF15O95150 251 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms