RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 RRM2BQ7LG56 351 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 CYP4Z1Q86W10 505 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 RNF113BQ8IZP6 322 aaKnown RBP14.48□□□□□ -0.09
TRIM39-209ENST00000428728 ZNF418Q8TF45 676 aaPredicted RBP14.48□□□□□ -0.09
TRIM39-209ENST00000428728 RASD2Q96D21 266 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 TMPRSS13Q9BYE2 586 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 NDEL1Q9GZM8 345 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 RERGLQ9H628 205 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 CCDC134Q9H6E4 229 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 DCAF16Q9NXF7 216 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 CGGBP1Q9UFW8 167 aaPredicted RBP14.48□□□□□ -0.09
TRIM39-209ENST00000428728 NDRG4Q9ULP0 352 aaKnown RBP14.48□□□□□ -0.09
TRIM39-209ENST00000428728 A0A0A6YYJ9 748 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 TEX13CA0A0J9YWL9 993 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 SGCEO43556 437 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 ICMTO60725 284 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 CTLA4P16410 223 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 GSTM3P21266 225 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 RBMXP38159 391 aaKnown RBP14.47□□□□□ -0.09
TRIM39-209ENST00000428728 ACTG1P63261 375 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 TNFAIP6P98066 277 aaPredicted RBP14.47□□□□□ -0.09
TRIM39-209ENST00000428728 SCRN3Q0VDG4 424 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 PSG7Q13046 419 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 MTX3Q5HYI7 312 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 ARL9Q6T311 187 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 C12orf54Q6X4T0 127 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 TMPRSS11FQ6ZWK6 438 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 SYT9Q86SS6 491 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 C1orf174Q8IYL3 243 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 KCTD14Q9BQ13 255 aaPredicted RBP14.47□□□□□ -0.09
TRIM39-209ENST00000428728 NMNAT1Q9HAN9 279 aaPredicted RBP14.47□□□□□ -0.09
TRIM39-209ENST00000428728 TMEM5Q9Y2B1 443 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 ENPP4Q9Y6X5 453 aa14.47□□□□□ -0.09
TRIM39-209ENST00000428728 PRSS37A4D1T9 235 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 ADH4P08319 380 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 LIPAP38571 399 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 LCN2P80188 198 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 SLC3A1Q07837 685 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 C1orf94Q6P1W5 598 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 C8orf82Q6P1X6 216 aaPredicted RBP14.46□□□□□ -0.09
TRIM39-209ENST00000428728 VASH1Q7L8A9 365 aaPredicted RBP14.46□□□□□ -0.09
TRIM39-209ENST00000428728 FAM122BQ7Z309 247 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 C1QL2Q7Z5L3 287 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 TSEN54Q7Z6J9 526 aaKnown RBP14.46□□□□□ -0.09
TRIM39-209ENST00000428728 PEG10Q86TG7 708 aaKnown RBP14.46□□□□□ -0.09
TRIM39-209ENST00000428728 TREML1Q86YW5 311 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 FAM156AQ8NDB6 213 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 NPEPL1Q8NDH3 523 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 SLC7A13Q8TCU3 470 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 HOPXQ9BPY8 73 aaPredicted RBP14.46□□□□□ -0.09
TRIM39-209ENST00000428728 EFCAB1Q9HAE3 211 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 PLEK2Q9NYT0 353 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 IL20RAQ9UHF4 553 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 ZDHHC8Q9ULC8 765 aa14.46□□□□□ -0.09
TRIM39-209ENST00000428728 SOCS2O14508 198 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 IMPA2O14732 288 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 CCDC22O60826 627 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 NDUFB2O95178 105 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 H1F0P07305 194 aaKnown RBP14.45□□□□□ -0.1
TRIM39-209ENST00000428728 CD55P08174 381 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 COX5BP10606 129 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 AQP6Q13520 282 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 HSP90B2PQ58FF3 399 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 ZER1Q7Z7L7 766 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 TEX29Q8N6K0 151 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 OR2Z1Q8NG97 314 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 ST7LQ8TDW4 575 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 SLC7A6Q92536 515 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 DCLRE1CQ96SD1 692 aaKnown RBP14.45□□□□□ -0.1
TRIM39-209ENST00000428728 DIRC2Q96SL1 478 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 SYT4Q9H2B2 425 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 ANKRD19PQ9H560 264 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 ASH2LQ9UBL3 628 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 EGFL7Q9UHF1 273 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 KLHL21Q9UJP4 597 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 PURGQ9UJV8 347 aaKnown RBP14.45□□□□□ -0.1
TRIM39-209ENST00000428728 PCDHB10Q9UN67 800 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 POLR1DQ9Y2S0 133 aa14.45□□□□□ -0.1
TRIM39-209ENST00000428728 J3QLI3 93 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 SLC16A7O60669 478 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 TNFSF4P23510 183 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 SDHAP31040 664 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 LIMS1P48059 325 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 HACD2Q6Y1H2 254 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.44□□□□□ -0.1
TRIM39-209ENST00000428728 ZFAND2BQ8WV99 257 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 RSRC1Q96IZ7 334 aaKnown RBP14.44□□□□□ -0.1
TRIM39-209ENST00000428728 SLC6A7Q99884 636 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 WACQ9BTA9 647 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 TBCCD1Q9NVR7 557 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 RPS6KA6Q9UK32 745 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 SIGLEC7Q9Y286 467 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 COA3Q9Y2R0 106 aaPredicted RBP14.44□□□□□ -0.1
TRIM39-209ENST00000428728 FAM32AQ9Y421 112 aaKnown RBP14.44□□□□□ -0.1
TRIM39-209ENST00000428728 NPTNQ9Y639 398 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 V9GYQ6 96 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 DOCK11Q5JSL3 2073 aa14.44□□□□□ -0.1
TRIM39-209ENST00000428728 ANK2Q01484 3957 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 TRBV4-1A0A0J9YWV2 114 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 AHCYL1O43865 530 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms