RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SRSF4Q08170 494 aaKnown RBP15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 INTS11Q5TA45 600 aaKnown RBP15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 LRRN1Q6UXK5 716 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 C17orf107Q6ZR85 190 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 MUC20Q8N307 709 aaPredicted RBP15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 CLDN22Q8N7P3 220 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 NPEPL1Q8NDH3 523 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 TMEM239Q8WW34 195 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 C7orf26Q96N11 449 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 ALG12Q9BV10 488 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 SSBP3Q9BWW4 388 aaPredicted RBP15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 IL19Q9UHD0 177 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 NDRG4Q9ULP0 352 aaKnown RBP15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 SH3GLB1Q9Y371 365 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 MMP24Q9Y5R2 645 aa15.36■□□□□ 0.05
UPK3BP1-201ENST00000428678 TMEM178BH3BS89 294 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 PLATP00750 562 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 TSPAN19P0C672 248 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 PPIAL4GP0DN37 164 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 RPS2P15880 293 aaKnown RBP15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 MSR1P21757 451 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 ENDOGQ14249 297 aaKnown RBP15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 ALG10Q5BKT4 473 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 RASSF5Q8WWW0 418 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 WFDC12Q8WWY7 111 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 ZDHHC16Q969W1 377 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 UPRTQ96BW1 309 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 CMBLQ96DG6 245 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 THOC1Q96FV9 657 aaKnown RBP15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 OR2V2Q96R30 315 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 TNFRSF19Q9NS68 423 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 PDP1Q9P0J1 537 aaPredicted RBP15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 RIMS3Q9UJD0 308 aa15.35■□□□□ 0.05
UPK3BP1-201ENST00000428678 IGHV2-70DA0A0C4DH43 119 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 FAM181BA6NEQ2 426 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 C12orf71A8MTZ7 269 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 SHOX2O60902 331 aaPredicted RBP15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 ZNF205O95201 554 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 IGF2P01344 180 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 WNT2P09544 360 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 TNFRSF1BP20333 461 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 KITLGP21583 273 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 HTR5AP47898 357 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 MMP16P51512 607 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 CRYBA2P53672 197 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 RPL27P61353 136 aaKnown RBP15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 GNB2P62879 340 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 PAX2Q02962 417 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 OCLNQ16625 522 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 KIR3DL3Q8N743 410 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 OR10A6Q8NH74 314 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 FNDC8Q8TC99 324 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 LIPHQ8WWY8 451 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 CCT8L2Q96SF2 557 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 KAT8Q9H7Z6 458 aaKnown RBP15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 BEX1Q9HBH7 125 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 TBCCD1Q9NVR7 557 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 NDUFAF1Q9Y375 327 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 MED31Q9Y3C7 131 aa15.34■□□□□ 0.05
UPK3BP1-201ENST00000428678 A0A1B0GUS0 222 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 ANGPT2O15123 496 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 OR5F1O95221 314 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 CRYBA1P05813 215 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 RAG2P55895 527 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 PIN1Q13526 163 aaPredicted RBP15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 DEFB112Q30KQ8 113 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 BRICD5Q6PL45 260 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 BRD3OSQ6XYD6 125 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 FOXL2NBQ6ZUU3 175 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 IGFN1Q86VF2 1251 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 KLBQ86Z14 1044 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 DPP10Q8N608 796 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 ATG16L2Q8NAA4 619 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 OR4F5Q8NH21 305 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 RAB40AQ8WXH6 277 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 TLCD1Q96CP7 247 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 RABEP2Q9H5N1 569 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 GCM1Q9NP62 436 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 EMC7Q9NPA0 242 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 RAB21Q9UL25 225 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 HIF3AQ9Y2N7 669 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 STARD10Q9Y365 291 aa15.33■□□□□ 0.04
UPK3BP1-201ENST00000428678 IFNL4K9M1U5 179 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 PIP5K1CO60331 668 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 DOK2O60496 412 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 COX5BP10606 129 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 TUBG1P23258 451 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 ERFP50548 548 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 CTXN1P60606 82 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 NFYCQ13952 458 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 VMACQ2NL98 169 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 ZNF362Q5T0B9 420 aaPredicted RBP15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 C1orf94Q6P1W5 598 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 SYT9Q86SS6 491 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 OR5AS1Q8N127 324 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 POU5F2Q8N7G0 328 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 OR10S1Q8NGN2 331 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 ZNF420Q8TAQ5 688 aaPredicted RBP15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 LRRC8CQ8TDW0 803 aa15.32■□□□□ 0.04
UPK3BP1-201ENST00000428678 HAVCR1Q96D42 359 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms