RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 IGHV5-51A0A0C4DH38 117 aa15.7■□□□□ 0.1
PHRF1-202ENST00000413872 NAA50Q9GZZ1 169 aaKnown RBP15.7■□□□□ 0.1
PHRF1-202ENST00000413872 A0A1W2PS29 197 aa15.7■□□□□ 0.1
PHRF1-202ENST00000413872 ZNF136P52737 540 aa15.7■□□□□ 0.1
PHRF1-202ENST00000413872 KIRREL2Q6UWL6 708 aa15.7■□□□□ 0.1
PHRF1-202ENST00000413872 COMTD1Q86VU5 262 aa15.7■□□□□ 0.1
PHRF1-202ENST00000413872 BHLHE23Q8NDY6 225 aa15.7■□□□□ 0.1
PHRF1-202ENST00000413872 PDCD1LG2Q9BQ51 273 aa15.7■□□□□ 0.1
PHRF1-202ENST00000413872 CLEC1BQ9P126 229 aa15.7■□□□□ 0.1
PHRF1-202ENST00000413872 PRELID1Q9Y255 219 aa15.7■□□□□ 0.1
PHRF1-202ENST00000413872 C17orf112F2Z3M2 114 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 FXYD1O00168 92 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 SFRP5Q5T4F7 317 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 GFRALQ6UXV0 394 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 EGFL6Q8IUX8 553 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 DNAJC5GQ8N7S2 189 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 OR11G2Q8NGC1 345 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 CNTNAP3BQ96NU0 1288 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 TMEM43Q9BTV4 400 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 IKZF5Q9H5V7 419 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 ASF1BQ9NVP2 202 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 SLC5A6Q9Y289 635 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 A0A0D9SG52 128 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 TCRBV5S2A0A599 114 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 RAB11AP62491 216 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 ELP2Q6IA86 826 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 SLC22A25Q6T423 547 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 PLXDC2Q6UX71 529 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 RFPL4BQ6ZWI9 263 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 GIMAP1Q8WWP7 306 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 TNFSF11O14788 317 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 GUSBP08236 651 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 PTPN6P29350 595 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 OR51E1Q8TCB6 317 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 PLEKHF2Q9H8W4 249 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 LUZP4Q9P127 313 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 A0A1B0GV50 99 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 FOLR1P15328 257 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 ZNF14P17017 642 aaPredicted RBP15.69■□□□□ 0.1
PHRF1-202ENST00000413872 DOC2BQ14184 412 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 RNLSQ5VYX0 342 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 ZNF546Q86UE3 836 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 TMEM99Q8N816 258 aa15.69■□□□□ 0.1
PHRF1-202ENST00000413872 K7EPK0 472 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 SH2D1BO14796 132 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 CTSVO60911 334 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 HOXA1P49639 335 aaPredicted RBP15.68■□□□□ 0.1
PHRF1-202ENST00000413872 TFAP2EQ6VUC0 442 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 FAM71E2Q8N5Q1 922 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 OR52N5Q8NH56 324 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 KISS1RQ969F8 398 aaPredicted RBP15.68■□□□□ 0.1
PHRF1-202ENST00000413872 KCNIP2Q9NS61 270 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 SMCHD1A6NHR9 2005 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 SNRPD2P62316 118 aaKnown RBP15.68■□□□□ 0.1
PHRF1-202ENST00000413872 ARHGDIGQ99819 225 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 GPR173Q9NS66 373 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 MED29Q9NX70 200 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 R4GMQ9 66 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 TUSC2O75896 110 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 APOA2P02652 100 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 SERPINA7P05543 415 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 ABCD3P28288 659 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 LIPAP38571 399 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 HTR2BP41595 481 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 EDDM3AQ14507 147 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 TOMM34Q15785 309 aaPredicted RBP15.68■□□□□ 0.1
PHRF1-202ENST00000413872 ZNF766Q5HY98 468 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 FAHD1Q6P587 224 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 WFDC8Q8IUA0 241 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 LINC01555Q8NAE3 123 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 KCNJ16Q9NPI9 418 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 EXO1Q9UQ84 846 aaKnown RBP15.68■□□□□ 0.1
PHRF1-202ENST00000413872 C5orf49A4QMS7 147 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 TMEM127O75204 238 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 NDUFB7P17568 137 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 RPS27AP62979 156 aaKnown RBP15.68■□□□□ 0.1
PHRF1-202ENST00000413872 UBA52P62987 128 aaKnown RBP15.68■□□□□ 0.1
PHRF1-202ENST00000413872 SLC35B4Q969S0 331 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 SDSLQ96GA7 329 aa15.68■□□□□ 0.1
PHRF1-202ENST00000413872 A0A087WUJ7 227 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 RIMKLAQ8IXN7 391 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 BEST4Q8NFU0 473 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 POC1BQ8TC44 478 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 ANKRD61A6NGH8 418 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 CCR9P51686 369 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 RHBDD2Q6NTF9 364 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 LGI3Q8N145 548 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 MBOAT4Q96T53 435 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 ERVMER34-1Q9H9K5 563 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 FBXL4Q9UKA2 621 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 ETV1P50549 477 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 RNPS1Q15287 305 aaKnown RBP15.67■□□□□ 0.1
PHRF1-202ENST00000413872 OR5AS1Q8N127 324 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 CISD2Q8N5K1 135 aaKnown RBP15.67■□□□□ 0.1
PHRF1-202ENST00000413872 ZNF321PQ8N8H1 164 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 OR51F2Q8NH61 342 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 GFOD1Q9NXC2 390 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 FBXO4Q9UKT5 387 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 NRASP01111 189 aa15.67■□□□□ 0.1
PHRF1-202ENST00000413872 CPEP16870 476 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms