RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ELF4Q99607 663 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-202ENST00000413219 CMKLR1Q99788 373 aa15.85■□□□□ 0.13
SDCBP-202ENST00000413219 MRPL22Q9NWU5 206 aaKnown RBP15.85■□□□□ 0.13
SDCBP-202ENST00000413219 VSX1Q9NZR4 365 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-202ENST00000413219 CGGBP1Q9UFW8 167 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-202ENST00000413219 TRAV36DV7A0A075B6V5 113 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 A0A1W2PQF6 199 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 OR2AT4A6NND4 320 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 RAD1O60671 282 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 SPARCP09486 303 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 ARHGDIBP52566 201 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 HSD17B7P56937 341 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 RPL27P61353 136 aaKnown RBP15.84■□□□□ 0.13
SDCBP-202ENST00000413219 CXADRP78310 365 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 PPP1R1AQ13522 171 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 SERTAD2Q14140 314 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 C3orf33Q6P1S2 294 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 RAB11FIP2Q7L804 512 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 NKAIN3Q8N8D7 197 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 FOXRED1Q96CU9 486 aaPredicted RBP15.84■□□□□ 0.13
SDCBP-202ENST00000413219 CST11Q9H112 138 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 MLXQ9UH92 298 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 HHLA2Q9UM44 414 aa15.84■□□□□ 0.13
SDCBP-202ENST00000413219 CARHSP1Q9Y2V2 147 aaKnown RBP15.84■□□□□ 0.13
SDCBP-202ENST00000413219 ZNF98A6NK75 572 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 MT-ATP6P00846 226 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 COL9A1P20849 921 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 DNASE1L1P49184 302 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 NAAAQ02083 359 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 SGCBQ16585 318 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 MICBQ29980 383 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 BEX5Q5H9J7 111 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 COL13A1Q5TAT6 717 aaPredicted RBP15.83■□□□□ 0.13
SDCBP-202ENST00000413219 ARMC6Q6NXE6 501 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 HAGHLQ6PII5 290 aaPredicted RBP15.83■□□□□ 0.13
SDCBP-202ENST00000413219 MAMDC2Q7Z304 686 aaPredicted RBP15.83■□□□□ 0.13
SDCBP-202ENST00000413219 C19orf47Q8N9M1 422 aaKnown RBP15.83■□□□□ 0.13
SDCBP-202ENST00000413219 OR5AP2Q8NGF4 316 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 SLC37A2Q8TED4 501 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 PPP1R14AQ96A00 147 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 ZNF524Q96C55 264 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 TMEM100Q9NV29 134 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 ASF1BQ9NVP2 202 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 FBXO9Q9UK97 447 aaPredicted RBP15.83■□□□□ 0.13
SDCBP-202ENST00000413219 GMEB2Q9UKD1 530 aa15.83■□□□□ 0.13
SDCBP-202ENST00000413219 CPED1A4D0V7 1026 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 METTL21EPA6NDL7 271 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 TMEM235A6NFC5 223 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 GPR31O00270 319 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 SRSF10O75494 262 aaKnown RBP15.83■□□□□ 0.12
SDCBP-202ENST00000413219 NSA2O95478 260 aaKnown RBP15.83■□□□□ 0.12
SDCBP-202ENST00000413219 ISG15P05161 165 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 MAOAP21397 527 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 CXCR1P25024 350 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 BIKQ13323 160 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 ERV3-1Q14264 604 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 ATXN7L3Q14CW9 347 aaPredicted RBP15.83■□□□□ 0.12
SDCBP-202ENST00000413219 PNLIPRP3Q17RR3 467 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 MOGAT2Q3SYC2 334 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 ZNF260Q3ZCT1 412 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 DHRS7BQ6IAN0 325 aaPredicted RBP15.83■□□□□ 0.12
SDCBP-202ENST00000413219 PGAP1Q75T13 922 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 LYPD6Q86Y78 171 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 LDLRAD3Q86YD5 345 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 PIK3IP1Q96FE7 263 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 NKX3-1Q99801 234 aaPredicted RBP15.83■□□□□ 0.12
SDCBP-202ENST00000413219 KXD1Q9BQD3 176 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 ABHD6Q9BV23 337 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 RAB22AQ9UL26 194 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 LRP12Q9Y561 859 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 R4GMQ9 66 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 FANCMQ8IYD8 2048 aa15.83■□□□□ 0.12
SDCBP-202ENST00000413219 TRBV6-7A0A0A0MS04 114 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 TEX13DA0A0J9YY54 714 aaPredicted RBP15.82■□□□□ 0.12
SDCBP-202ENST00000413219 PCP4L1A6NKN8 68 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 DCNP07585 359 aaKnown RBP15.82■□□□□ 0.12
SDCBP-202ENST00000413219 CD79AP11912 226 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 TPT1P13693 172 aaKnown RBP15.82■□□□□ 0.12
SDCBP-202ENST00000413219 HOXB2P14652 356 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 IL13RA1P78552 427 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 DCDP81605 110 aaKnown RBP15.82■□□□□ 0.12
SDCBP-202ENST00000413219 INSM1Q01101 510 aaPredicted RBP15.82■□□□□ 0.12
SDCBP-202ENST00000413219 EIF2B1Q14232 305 aaKnown RBP15.82■□□□□ 0.12
SDCBP-202ENST00000413219 CDNFQ49AH0 187 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 CORO6Q6QEF8 472 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 GTPBP8Q8N3Z3 284 aaPredicted RBP15.82■□□□□ 0.12
SDCBP-202ENST00000413219 FRMD1Q8N878 549 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 SLC30A7Q8NEW0 376 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 OR13C3Q8NGS6 347 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 OR52N5Q8NH56 324 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 PHOSPHO2Q8TCD6 241 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 ARL11Q969Q4 196 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 MBD2Q9UBB5 411 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 ZNF629Q9UEG4 869 aaPredicted RBP15.82■□□□□ 0.12
SDCBP-202ENST00000413219 GDF2Q9UK05 429 aaPredicted RBP15.82■□□□□ 0.12
SDCBP-202ENST00000413219 MPDZO75970 2070 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 DCDC2BA2VCK2 349 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 C11orf98E9PRG8 122 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 SLC16A7O60669 478 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 DUS4LO95620 317 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms