RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 C4BPBP20851 252 aa12.06□□□□□ -0.48
COL6A2-204ENST00000409416 MAPK3P27361 379 aaPredicted RBP12.06□□□□□ -0.48
COL6A2-204ENST00000409416 HSD11B1P28845 292 aa12.06□□□□□ -0.48
COL6A2-204ENST00000409416 SORDQ00796 357 aa12.06□□□□□ -0.48
COL6A2-204ENST00000409416 NR0B2Q15466 257 aa12.06□□□□□ -0.48
COL6A2-204ENST00000409416 SLC16A9Q7RTY1 509 aa12.06□□□□□ -0.48
COL6A2-204ENST00000409416 SLC38A9Q8NBW4 561 aa12.06□□□□□ -0.48
COL6A2-204ENST00000409416 HAVCR2Q8TDQ0 301 aa12.06□□□□□ -0.48
COL6A2-204ENST00000409416 RBPMSQ93062 196 aaKnown RBP12.06□□□□□ -0.48
COL6A2-204ENST00000409416 TSPAN32Q96QS1 320 aa12.06□□□□□ -0.48
COL6A2-204ENST00000409416 RBM24Q9BX46 236 aaKnown RBP12.06□□□□□ -0.48
COL6A2-204ENST00000409416 MS4A7Q9GZW8 240 aaPredicted RBP12.06□□□□□ -0.48
COL6A2-204ENST00000409416 TAS2R4Q9NYW5 299 aa12.06□□□□□ -0.48
COL6A2-204ENST00000409416 CKLFQ9UBR5 152 aa12.06□□□□□ -0.48
COL6A2-204ENST00000409416 SESN1Q9Y6P5 492 aa12.06□□□□□ -0.48
COL6A2-204ENST00000409416 A0A1B0GV50 99 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 TMEM235A6NFC5 223 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 PATE4P0C8F1 98 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 NAGAP17050 411 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 S1PR1P21453 382 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 CXCL12P48061 93 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 NKAPLQ5M9Q1 402 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 OR2G2Q8NGZ5 317 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 GPR148Q8TDV2 347 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 FBXO4Q9UKT5 387 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 EFCAB7A8K855 629 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 EEF1E1-BLOC1S5C9J1V9 151 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 RP2O75695 350 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 NSA2O95478 260 aaKnown RBP12.05□□□□□ -0.48
COL6A2-204ENST00000409416 CD3DP04234 171 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 AMY2AP04746 511 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 CD2P06729 351 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 PGCP20142 388 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 CD27P26842 260 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 GPR3P46089 330 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 ZNF74Q16587 644 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 CDNFQ49AH0 187 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 TCEAL6Q6IPX3 200 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 GLDNQ6ZMI3 551 aaPredicted RBP12.05□□□□□ -0.48
COL6A2-204ENST00000409416 MAMDC2Q7Z304 686 aaPredicted RBP12.05□□□□□ -0.48
COL6A2-204ENST00000409416 TCEAL3Q969E4 200 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 CYYR1Q96J86 154 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 MMP25Q9NPA2 562 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 HS3ST3A1Q9Y663 406 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 MEX3AA1L020 520 aaKnown RBP12.05□□□□□ -0.48
COL6A2-204ENST00000409416 RAB19A4D1S5 217 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 LINC00862A6NCI5 91 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 PRAF2O60831 178 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 KLK2P20151 261 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 C2orf68Q2NKX9 166 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 SLC22A6Q4U2R8 563 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 MESTQ5EB52 335 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 KLHL24Q6TFL4 600 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 ZNF283Q8N7M2 679 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 RELL2Q8NC24 303 aaPredicted RBP12.05□□□□□ -0.48
COL6A2-204ENST00000409416 FGGYQ96C11 551 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 HAVCR1Q96D42 359 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 KLHL15Q96M94 604 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 NECAB3Q96P71 396 aaPredicted RBP12.05□□□□□ -0.48
COL6A2-204ENST00000409416 GNRHR2Q96P88 292 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 CHST6Q9GZX3 395 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 POLE3Q9NRF9 147 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 EPHA6Q9UF33 1036 aa12.05□□□□□ -0.48
COL6A2-204ENST00000409416 NOP16Q9Y3C1 178 aaKnown RBP12.05□□□□□ -0.48
COL6A2-204ENST00000409416 PTRH2Q9Y3E5 179 aaKnown RBP12.05□□□□□ -0.48
COL6A2-204ENST00000409416 IGKV1D-42A0A075B6H8 117 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 LOC101059948A0A1B0GTJ6 334 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 A0A1B0GUH1 482 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 TCRBV16S1A1N1A0A5B0 115 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 GSTZ1O43708 216 aaPredicted RBP12.04□□□□□ -0.48
COL6A2-204ENST00000409416 RAB40ALP0C0E4 278 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 ACSM4P0C7M7 580 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 SDHAP31040 664 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 ARFRP1Q13795 201 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 RAB40AQ8WXH6 277 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 MIB2Q96AX9 1013 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 SCARF2Q96GP6 870 aaPredicted RBP12.04□□□□□ -0.48
COL6A2-204ENST00000409416 ZNF426Q9BUY5 554 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 PFDN2Q9UHV9 154 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 DSPP15924 2871 aaKnown RBP12.04□□□□□ -0.48
COL6A2-204ENST00000409416 ANKRD20A5PA0PJZ0 165 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 MPIG6BO95866 241 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 VSIG10L2P0DP72 767 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 CBX5P45973 191 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 LINC01590Q5TEZ4 76 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 RHOUQ7L0Q8 258 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 ABHD12BQ7Z5M8 362 aaPredicted RBP12.04□□□□□ -0.48
COL6A2-204ENST00000409416 C9orf40Q8IXQ3 194 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 OR10G3Q8NGC4 313 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 USB1Q9BQ65 265 aaKnown RBP12.04□□□□□ -0.48
COL6A2-204ENST00000409416 SDHAF2Q9NX18 166 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 PTTG3PQ9NZH4 202 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 ICAM5Q9UMF0 924 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 NAP1L6A6NFF2 107 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 PGAM2P15259 253 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 FOSL2P15408 326 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 NUDT1P36639 197 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 ZNF41P51814 821 aaPredicted RBP12.04□□□□□ -0.48
COL6A2-204ENST00000409416 CLRN1P58418 232 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 CLLU1Q5K131 121 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms