RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 NDRG4Q9ULP0 352 aaKnown RBP11.86□□□□□ -0.51
VPREB1-202ENST00000403807 PLEKHA6Q9Y2H5 1048 aa11.86□□□□□ -0.51
VPREB1-202ENST00000403807 ZNF593O00488 134 aaPredicted RBP11.85□□□□□ -0.51
VPREB1-202ENST00000403807 RER1O15258 196 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 PRODHO43272 600 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 DOK2O60496 412 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 SNAP29O95721 258 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 DANCRP0C864 163 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 CCL2P13500 99 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 GSTT1P30711 240 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 TTKP33981 857 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 RAD52P43351 418 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 CDC42P60953 191 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 TRIP10Q15642 601 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 ZIK1Q3SY52 487 aaPredicted RBP11.85□□□□□ -0.51
VPREB1-202ENST00000403807 CCDC92Q53HC0 331 aaPredicted RBP11.85□□□□□ -0.51
VPREB1-202ENST00000403807 LINC01590Q5TEZ4 76 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 AGAP6Q5VW22 663 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 KRT80Q6KB66 452 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 VHLLQ6RSH7 139 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 ARL9Q6T311 187 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 UNQ6126/PRO20091Q6UXV3 157 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 B3GLCTQ6Y288 498 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 ZNF771Q7L3S4 317 aaPredicted RBP11.85□□□□□ -0.51
VPREB1-202ENST00000403807 TCEANCQ8N8B7 351 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 ZNF511Q8NB15 262 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 TMEM171Q8WVE6 324 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 POM121L2Q96KW2 1035 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 CCL19Q99731 98 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 GRIP2Q9C0E4 1043 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 C8orf4Q9NR00 106 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 CA10Q9NS85 328 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 EIF3KQ9UBQ5 218 aaKnown RBP11.85□□□□□ -0.51
VPREB1-202ENST00000403807 CYB5R1Q9UHQ9 305 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 LAMP3Q9UQV4 416 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 LHFPL6Q9Y693 200 aa11.85□□□□□ -0.51
VPREB1-202ENST00000403807 HEATR1Q9H583 2144 aaKnown RBP11.84□□□□□ -0.51
VPREB1-202ENST00000403807 FBN2P35556 2912 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 LOC100509620A0A075B734 347 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 C5orf49A4QMS7 147 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 H0YHG0 523 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 SYNGR3O43761 229 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 PRKYO43930 277 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 ATE1O95260 518 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 CD53P19397 219 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 PCSK6P29122 969 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 GLRXP35754 106 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 GGT2P36268 569 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 HTR5AP47898 357 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 ENTPD1P49961 510 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 RPS7P62081 194 aaKnown RBP11.84□□□□□ -0.51
VPREB1-202ENST00000403807 RPS23P62266 143 aaKnown RBP11.84□□□□□ -0.51
VPREB1-202ENST00000403807 HIST1H3AP68431 136 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 EFNB1P98172 346 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 SNTB2Q13425 540 aaKnown RBP11.84□□□□□ -0.51
VPREB1-202ENST00000403807 RAB35Q15286 201 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 TEX30Q5JUR7 227 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 ELFN2Q5R3F8 820 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 HIST2H3PS2Q5TEC6 136 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 SLC18B1Q6NT16 456 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 CORO6Q6QEF8 472 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 HIST2H3AQ71DI3 136 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 VASH1Q7L8A9 365 aaPredicted RBP11.84□□□□□ -0.51
VPREB1-202ENST00000403807 LINC00346Q8IVM7 164 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 MUC15Q8N387 334 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 OR1F12Q8NHA8 337 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 TMEM163Q8TC26 289 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 TRUB1Q8WWH5 349 aaKnown RBP11.84□□□□□ -0.51
VPREB1-202ENST00000403807 HRASLS5Q96KN8 279 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 INTS14Q96SY0 518 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 PITX2Q99697 317 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 BCL2L14Q9BZR8 327 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 ZNF442Q9H7R0 627 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 WDR76Q9H967 626 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 GDF2Q9UK05 429 aaPredicted RBP11.84□□□□□ -0.51
VPREB1-202ENST00000403807 COMMD3-BMI1R4GMX3 469 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 CADP27708 2225 aa11.84□□□□□ -0.51
VPREB1-202ENST00000403807 APCP25054 2843 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 SOD3P08294 240 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 BMP4P12644 408 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 THBS4P35443 961 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 SERPINF1P36955 418 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 UCP2P55851 309 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 NKX6-1P78426 367 aaPredicted RBP11.83□□□□□ -0.52
VPREB1-202ENST00000403807 ECH1Q13011 328 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 APOFQ13790 326 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 PCK2Q16822 640 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 LRRC36Q1X8D7 754 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 LCN1P1Q5VSP4 162 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 NXNL2Q5VZ03 156 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 LPCAT4Q643R3 524 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 TMEM154Q6P9G4 183 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 LYPD4Q6UWN0 246 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 SHFQ7M4L6 423 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 ERI1Q8IV48 349 aaKnown RBP11.83□□□□□ -0.52
VPREB1-202ENST00000403807 C1orf174Q8IYL3 243 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 GALNT4Q8N4A0 578 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 PAQR4Q8N4S7 273 aaPredicted RBP11.83□□□□□ -0.52
VPREB1-202ENST00000403807 PACRGLQ8N7B6 248 aa11.83□□□□□ -0.52
VPREB1-202ENST00000403807 BBS1Q8NFJ9 593 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms