RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 TRAV17A0A0B4J275 112 aa22.65■■□□□ 1.22
CPNE1-205ENST00000401607 SLC43A1O75387 559 aa22.65■■□□□ 1.22
CPNE1-205ENST00000401607 PPP5CP53041 499 aa22.65■■□□□ 1.22
CPNE1-205ENST00000401607 ZNF45Q02386 682 aa22.65■■□□□ 1.22
CPNE1-205ENST00000401607 C3AR1Q16581 482 aa22.65■■□□□ 1.22
CPNE1-205ENST00000401607 Q499Y3 187 aa22.65■■□□□ 1.22
CPNE1-205ENST00000401607 HSD17B12Q53GQ0 312 aa22.65■■□□□ 1.22
CPNE1-205ENST00000401607 CEP19Q96LK0 163 aa22.65■■□□□ 1.22
CPNE1-205ENST00000401607 SCNM1Q9BWG6 230 aa22.65■■□□□ 1.22
CPNE1-205ENST00000401607 SPRR3Q9UBC9 169 aa22.65■■□□□ 1.22
CPNE1-205ENST00000401607 ASH2LQ9UBL3 628 aa22.65■■□□□ 1.22
CPNE1-205ENST00000401607 WASF3Q9UPY6 502 aa22.65■■□□□ 1.22
CPNE1-205ENST00000401607 ASPMQ8IZT6 3477 aa22.64■■□□□ 1.22
CPNE1-205ENST00000401607 TRGV5A0A0B4J1U4 118 aa22.64■■□□□ 1.22
CPNE1-205ENST00000401607 H2BFMP0C1H6 154 aa22.64■■□□□ 1.22
CPNE1-205ENST00000401607 CFL1P23528 166 aaKnown RBP22.64■■□□□ 1.22
CPNE1-205ENST00000401607 CD40LGP29965 261 aa22.64■■□□□ 1.22
CPNE1-205ENST00000401607 ODF4Q2M2E3 257 aa22.64■■□□□ 1.22
CPNE1-205ENST00000401607 SYT9Q86SS6 491 aa22.64■■□□□ 1.22
CPNE1-205ENST00000401607 ZNF837Q96EG3 531 aaPredicted RBP22.64■■□□□ 1.22
CPNE1-205ENST00000401607 RBM24Q9BX46 236 aaKnown RBP22.64■■□□□ 1.22
CPNE1-205ENST00000401607 NELFAQ9H3P2 528 aa22.64■■□□□ 1.22
CPNE1-205ENST00000401607 LDAHQ9H6V9 325 aa22.64■■□□□ 1.22
CPNE1-205ENST00000401607 PAQR5Q9NXK6 330 aaPredicted RBP22.64■■□□□ 1.22
CPNE1-205ENST00000401607 B3GNT3Q9Y2A9 372 aa22.64■■□□□ 1.22
CPNE1-205ENST00000401607 MSR1P21757 451 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 LSM6P62312 80 aaKnown RBP22.63■■□□□ 1.21
CPNE1-205ENST00000401607 SGCAQ16586 387 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 CEP78Q5JTW2 689 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 OR51A4Q8NGJ6 313 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 OR2AJ1Q8NGZ0 328 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 TMEM45BQ96B21 275 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 ZNF416Q9BWM5 594 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 GTF2A1LQ9UNN4 478 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 EMC9Q9Y3B6 208 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 GPR171O14626 319 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 SYNGR4O95473 234 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 RAB3BP20337 219 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 SFXN4Q6P4A7 337 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 SNX29P2Q8IUI4 249 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 SLC30A2Q9BRI3 323 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 PNRC2Q9NPJ4 139 aaKnown RBP22.63■■□□□ 1.21
CPNE1-205ENST00000401607 B3GAT2Q9NPZ5 323 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 G6PC2Q9NQR9 355 aa22.63■■□□□ 1.21
CPNE1-205ENST00000401607 CACNA1CQ13936 2221 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 OCM2P0CE71 109 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 THBS2P35442 1172 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 SOX2P48431 317 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 IFITM3Q01628 133 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 ENDOGQ14249 297 aaKnown RBP22.62■■□□□ 1.21
CPNE1-205ENST00000401607 SPANXN2Q5MJ10 180 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 DDI2Q5TDH0 399 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 ZNF544Q6NX49 715 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 HIST2H2ABQ8IUE6 130 aaPredicted RBP22.62■■□□□ 1.21
CPNE1-205ENST00000401607 FNDC9Q8TBE3 224 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 GPR148Q8TDV2 347 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 WDYHV1Q96HA8 205 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 EXO5Q9H790 373 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 COMMD3Q9UBI1 195 aa22.62■■□□□ 1.21
CPNE1-205ENST00000401607 MCTS1Q9ULC4 181 aaKnown RBP22.62■■□□□ 1.21
CPNE1-205ENST00000401607 LOC110117498-PIK3R3F6TDL0 507 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 RER1O15258 196 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 SRMP19623 302 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 ZNF84P51523 738 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 SLC25A35Q3KQZ1 300 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 IDNKQ5T6J7 187 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 LINGO2Q7L985 606 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 V9GYH0 126 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 PHF3Q92576 2039 aaKnown RBP22.61■■□□□ 1.21
CPNE1-205ENST00000401607 ZFHX4Q86UP3 3567 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 TRBV5-7A0A0A0MS05 114 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 TMEM269A0A1B0GVZ9 245 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 ZNF878C9JN71 531 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 H3BSH0 61 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 TFECO14948 347 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-205ENST00000401607 ZNF24P17028 368 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 MAPK3P27361 379 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-205ENST00000401607 DCTDP32321 178 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 ALKBH3Q96Q83 286 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-205ENST00000401607 SLC25A18Q9H1K4 315 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 FAM206AQ9NX38 181 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 OR52A1Q9UKL2 312 aa22.61■■□□□ 1.21
CPNE1-205ENST00000401607 A0A1B0GVG6 124 aa22.6■■□□□ 1.21
CPNE1-205ENST00000401607 CPN1P15169 458 aa22.6■■□□□ 1.21
CPNE1-205ENST00000401607 GUCA1AP43080 201 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-205ENST00000401607 MMP16P51512 607 aa22.6■■□□□ 1.21
CPNE1-205ENST00000401607 MRPS34P82930 218 aaKnown RBP22.6■■□□□ 1.21
CPNE1-205ENST00000401607 RHOUQ7L0Q8 258 aa22.6■■□□□ 1.21
CPNE1-205ENST00000401607 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.6■■□□□ 1.21
CPNE1-205ENST00000401607 SNIP1Q8TAD8 396 aaKnown RBP22.6■■□□□ 1.21
CPNE1-205ENST00000401607 ZCCHC4Q9H5U6 513 aa22.6■■□□□ 1.21
CPNE1-205ENST00000401607 CRLF2Q9HC73 371 aa22.6■■□□□ 1.21
CPNE1-205ENST00000401607 SSUH2Q9Y2M2 353 aa22.6■■□□□ 1.21
CPNE1-205ENST00000401607 AK6Q9Y3D8 172 aaKnown RBP22.6■■□□□ 1.21
CPNE1-205ENST00000401607 ZNF407Q9C0G0 2248 aa22.6■■□□□ 1.21
CPNE1-205ENST00000401607 IGHG3P01860 377 aa22.59■■□□□ 1.21
CPNE1-205ENST00000401607 GPR137CQ8N3F9 429 aa22.59■■□□□ 1.21
CPNE1-205ENST00000401607 ACOT12Q8WYK0 555 aa22.59■■□□□ 1.21
CPNE1-205ENST00000401607 GFI1Q99684 422 aa22.59■■□□□ 1.21
CPNE1-205ENST00000401607 DAPK2Q9UIK4 370 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms