RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 ZCCHC4Q9H5U6 513 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 GPR45Q9Y5Y3 372 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 URGCP-MRPS24S4R325 110 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 ACOD1A6NK06 481 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 CDC14BO60729 498 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 GLAP06280 429 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 RPS25P62851 125 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 ILKQ13418 452 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 DHRS11Q6UWP2 260 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 FBXL6Q8N531 539 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 OR51A2Q8NGJ7 313 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 TNFRSF13CQ96RJ3 184 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 ZNF331Q9NQX6 463 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 RAB22AQ9UL26 194 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 HRO43593 1189 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 USF1P22415 310 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 MS4A2Q01362 244 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 RTL8BQ17RB0 113 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 RGS7BPQ6MZT1 257 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 MARCH3Q86UD3 253 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 SIAH1Q8IUQ4 282 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 SFTPA2Q8IWL1 248 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 SFTPA1Q8IWL2 248 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 TMIGD2Q96BF3 282 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 FYTTD1Q96QD9 318 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 NRSN2Q9GZP1 204 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 LOC100289279A0A1B0GTE1 492 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 SMIM18P0DKX4 95 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 JUNBP17275 347 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 GLRA1P23415 457 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 TNFSF8P32971 234 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 TAGLN2P37802 199 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 EMX1Q04741 257 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 LRRC56Q8IYG6 542 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 NKAIN3Q8N8D7 197 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 GJC3Q8NFK1 279 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 NOL4LQ96MY1 436 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 NDFIP1Q9BT67 221 aa10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 METTL17Q9H7H0 456 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 COL2A1P02458 1487 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-215ENST00000399637 IGKV6-21A0A0C4DH24 114 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 J3KRW8 73 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 J3QR89 54 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 SLC19A1P41440 591 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 PMP22Q01453 160 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 HDAC8Q9BY41 377 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 POFUT1Q9H488 388 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 LHX3Q9UBR4 397 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 OR52A1Q9UKL2 312 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 ATP6V1G2-DDX39BF2Z307 99 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 TMEM189-UBE2V1I3L0A0 370 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 TNFSF11O14788 317 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 DFFBO76075 338 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 CSF3P09919 207 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 ZNF93P35789 620 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 Q499Y3 187 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 FOXB2Q5VYV0 432 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 OR10K2Q6IF99 312 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 RHOUQ7L0Q8 258 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 SEMA6DQ8NFY4 1073 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 FBXL2Q9UKC9 423 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 NDRG4Q9ULP0 352 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 SBK2P0C263 348 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 ZDHHC11BP0C7U3 371 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 CT45A10P0DMU9 189 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 GABRB3P28472 473 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 GDNFP39905 211 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 MRPL19P49406 292 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 HBA1P69905 142 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 ACKR1Q16570 336 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 GGTA1PQ4G0N0 100 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 MS4A4AQ96JQ5 239 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 TREX1Q9NSU2 369 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 LRP5O75197 1615 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 NWD2Q9ULI1 1742 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 TRAV17A0A0B4J275 112 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 SPAARA0A1B0GVQ0 90 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 ZNF83P51522 516 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 PHLDA2Q53GA4 152 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 LRRC10Q5BKY1 277 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 ADAMTSL4Q6UY14 1074 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 SSX9Q7RTT3 188 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 ADGRE4PQ86SQ3 457 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 KDM8Q8N371 416 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 RNF141Q8WVD5 230 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 KCTD12Q96CX2 325 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 MRPS24Q96EL2 167 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 LPAR2Q9HBW0 351 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 COLQQ9Y215 455 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 IGKV6D-21A0A0A0MT36 114 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 A1L4Q6 167 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 S100A4P26447 101 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 MTNR1BP49286 362 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 PCBP3P57721 371 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 OR8G2PQ6IF36 304 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 BCO1Q9HAY6 547 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 A4GALTQ9NPC4 353 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 OSGIN1Q9UJX0 560 aa10.12□□□□□ -0.79
CACNA1C-215ENST00000399637 A0A1W2PRD5 423 aa10.11□□□□□ -0.79
CACNA1C-215ENST00000399637 A0A1W2PRF3 423 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms