RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 FRMPD3Q5JV73 1810 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 RAB19A4D1S5 217 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 C17orf51A8MQB3 221 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 C1QTNF3-AMACRE9PGA6 284 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 FAM229AH3BQW9 127 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 SULT2B1O00204 365 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 OR6A2O95222 327 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 ITGB2P05107 769 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 HPGDP15428 266 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 LAG3P18627 525 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 ADH6P28332 368 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 SDHAP31040 664 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 RORAP35398 523 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 ACTBP60709 375 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 ACTG1P63261 375 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 MPPED2Q15777 294 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 CSNK1A1LQ8N752 337 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 OR5AP2Q8NGF4 316 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 OR4A4PQ8NGN8 299 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 PHYHIPQ92561 330 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 FOXRED1Q96CU9 486 aaPredicted RBP8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 RSPRY1Q96DX4 576 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 CYYR1Q96J86 154 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF587Q96SQ5 575 aaPredicted RBP8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 SEMA6CQ9H3T2 930 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 CHMP1AQ9HD42 196 aaPredicted RBP8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 RPS10P5Q9NQ39 176 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 DUSP22Q9NRW4 184 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 UQCC1Q9NVA1 299 aa8.91□□□□□ -0.98
PTCHD4-202ENST00000398738 LOC100289279A0A1B0GTE1 492 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 RDH16O75452 317 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 WISP1O95388 367 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 SERPINF1P36955 418 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 OR2B8PP59922 312 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 FAM109BQ6ICB4 259 aaPredicted RBP8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 SFTPA2Q8IWL1 248 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 TMIEQ8NEW7 156 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 OR4K17Q8NGC6 315 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 OR13C8Q8NGS7 320 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 SLC22A8Q8TCC7 542 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 PATE1Q8WXA2 126 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 BCL2L14Q9BZR8 327 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 PRMT8Q9NR22 394 aaPredicted RBP8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 GSN-AS1Q9NRJ2 163 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 MIOXQ9UGB7 285 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 MPDZO75970 2070 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 A0A1W2PPE3 182 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 MED19A0JLT2 244 aaPredicted RBP8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 ADAP1O75689 374 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 SNAPC5O75971 98 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 HTR3BO95264 441 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 APBB3O95704 486 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 GPR75O95800 540 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 IFNA6P05013 189 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 SNRNP70P08621 437 aaKnown RBP8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 CPT2P23786 658 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 MECP2P51608 486 aaKnown RBP8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 S100A10P60903 97 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNHIT3Q15649 155 aaPredicted RBP8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 LILRA6Q6PI73 481 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 USP53Q70EK8 1073 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 SLC16A9Q7RTY1 509 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 TSACCQ96A04 125 aaPredicted RBP8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 DEFB118Q96PH6 123 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 CLCC1Q96S66 551 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 SMIM3Q9BZL3 60 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 B9D1Q9UPM9 204 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 HEATR5AQ86XA9 2040 aa8.9□□□□□ -0.98
PTCHD4-202ENST00000398738 PLXNA2O75051 1894 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 MSGN1A6NI15 193 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 H0Y8X5 98 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 SSX5O60225 188 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 LMX1BO60663 402 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 NUDT14O95848 222 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 PNPP00491 289 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 PMP2P02689 132 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 GSTP1P09211 210 aaKnown RBP8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 MUC1P15941 1255 aaPredicted RBP8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 ACTR1BP42025 376 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 KIR3DL2P43630 455 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 GPR143P51810 404 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 RAB5BP61020 215 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 ACTR1AP61163 376 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 PSG6Q00889 435 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 CORO6Q6QEF8 472 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 GALNTL5Q7Z4T8 443 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 BAP18Q8IXM2 172 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 RCBTB1Q8NDN9 531 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 GPX8Q8TED1 209 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 TCEAL3Q969E4 200 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 SLC25A44Q96H78 314 aaPredicted RBP8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 SLC41A2Q96JW4 573 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 SPACA5Q96QH8 159 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 KLHDC3Q9BQ90 382 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 FGF22Q9HCT0 170 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 KLK13Q9UKR3 277 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 DHDHQ9UQ10 334 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 KCNK7Q9Y2U2 307 aa8.9□□□□□ -0.99
PTCHD4-202ENST00000398738 MRPS18BQ9Y676 258 aaKnown RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms