RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 NDUFB2O95178 105 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 PTHP01270 115 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 DBHP09172 617 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 GAAP10253 952 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 PSKH1P11801 424 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 ATP6V1B2P21281 511 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 PCMT1P22061 227 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 RPL4P36578 427 aaKnown RBP7.51□□□□□ -1.21
ATG4A-205ENST00000394892 CRYBB2P43320 205 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 GDI2P50395 445 aaKnown RBP7.51□□□□□ -1.21
ATG4A-205ENST00000394892 HIST1H3AP68431 136 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 SCGB2A2Q13296 93 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 KRR1Q13601 381 aaKnown RBP7.51□□□□□ -1.21
ATG4A-205ENST00000394892 TSTQ16762 297 aaKnown RBP7.51□□□□□ -1.21
ATG4A-205ENST00000394892 MEP1BQ16820 701 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 FGD3Q5JSP0 725 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 HIST2H3PS2Q5TEC6 136 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 USP51Q70EK9 711 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 HIST2H3AQ71DI3 136 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 PGAM4Q8N0Y7 254 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 ABHD4Q8TB40 342 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 ZNRF4Q8WWF5 429 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 PYURFQ96I23 114 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 C4orf45Q96LM5 186 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 ZNF570Q96NI8 536 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 DDOQ99489 341 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 LPAR2Q9HBW0 351 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 MSL2Q9HCI7 577 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 VNN3Q9NY84 501 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 SLCO1C1Q9NYB5 712 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 GRHPRQ9UBQ7 328 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 RPS6KA6Q9UK32 745 aa7.51□□□□□ -1.21
ATG4A-205ENST00000394892 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.51□□□□□ -1.21
ATG4A-205ENST00000394892 IGHV1-69-2A0A0G2JMI3 117 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 TCRBV5S2A0A599 114 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 SOCS2O14508 198 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 RER1O15258 196 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 SPRY1O43609 319 aaPredicted RBP7.5□□□□□ -1.21
ATG4A-205ENST00000394892 SPRY3O43610 288 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 PPP1R3DO95685 299 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 TFP02787 698 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 ADH4P08319 380 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 T-ENOLP0DO92 83 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 SDHAP31040 664 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 IFNA8P32881 189 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 GSSP48637 474 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 ZNF81P51508 661 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 DVL1P1P54792 670 aaPredicted RBP7.5□□□□□ -1.21
ATG4A-205ENST00000394892 GNGT1P63211 74 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 MVKQ03426 396 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 KCNMB1Q16558 191 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 KRTAP27-1Q3LI81 207 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 ZNF718Q3SXZ3 478 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 ZNF362Q5T0B9 420 aaPredicted RBP7.5□□□□□ -1.21
ATG4A-205ENST00000394892 ZNF770Q6IQ21 691 aaPredicted RBP7.5□□□□□ -1.21
ATG4A-205ENST00000394892 TMEM154Q6P9G4 183 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 DPY19L2P2Q6ZN68 376 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 SYT9Q86SS6 491 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 CYP4Z1Q86W10 505 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 OR6V1Q8N148 313 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 FITM2Q8N6M3 262 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 OR4C15Q8NGM1 316 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 FNDC8Q8TC99 324 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 ZMYND19Q96E35 227 aaPredicted RBP7.5□□□□□ -1.21
ATG4A-205ENST00000394892 G6PC2Q9NQR9 355 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 ASH2LQ9UBL3 628 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 TAGLN3Q9UI15 199 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 TMEFF2Q9UIK5 374 aaPredicted RBP7.5□□□□□ -1.21
ATG4A-205ENST00000394892 TMEM5Q9Y2B1 443 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 WIPI2Q9Y4P8 454 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 LHFPL6Q9Y693 200 aa7.5□□□□□ -1.21
ATG4A-205ENST00000394892 A0A0A6YYJ9 748 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 C5orf63A6NC05 138 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 OR6C68A6NDL8 312 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 C12orf71A8MTZ7 269 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 B4DSR2 109 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 NDUFAB1O14561 156 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 SGCEO43556 437 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 AHCYL1O43865 530 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 DOK2O60496 412 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 KHDRBS3O75525 346 aaKnown RBP7.49□□□□□ -1.21
ATG4A-205ENST00000394892 IGHV2-5P01817 119 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 COX5BP10606 129 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 HIST1H1CP16403 213 aaKnown RBP7.49□□□□□ -1.21
ATG4A-205ENST00000394892 FPR3P25089 353 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 HTR5AP47898 357 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 PRSS12P56730 875 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 PCBD1P61457 104 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 MS4A2Q01362 244 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 PPP1R8Q12972 351 aaKnown RBP7.49□□□□□ -1.21
ATG4A-205ENST00000394892 CDK5R2Q13319 367 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 RFX4Q33E94 735 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 PCGF3Q3KNV8 242 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 GPR139Q6DWJ6 353 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 PGBD2Q6P3X8 592 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 CORO6Q6QEF8 472 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 SMARCD3Q6STE5 483 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 LYPD4Q6UWN0 246 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 CPLX4Q7Z7G2 160 aa7.49□□□□□ -1.21
ATG4A-205ENST00000394892 GLB1L2Q8IW92 636 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms