RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 WNT11O96014 354 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 HTR1DP28221 377 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 ACVRL1P37023 503 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 SULT1A1P50225 295 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 ERASQ7Z444 233 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 OR51S1Q8NGJ8 323 aa12.38□□□□□ -0.43
USP49-203ENST00000394253 TCRBV3S1A0A5B6 114 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 SOWAHAQ2M3V2 549 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 SLC10A6Q3KNW5 377 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 ANKRD16Q6P6B7 361 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 TMED6Q8WW62 240 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 ATP5SQ99766 215 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 GPR61Q9BZJ8 451 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 NFS1Q9Y697 457 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 GPR25O00155 361 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 SLC35A1P78382 337 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 ACKR1Q16570 336 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 GRAMD2AQ8IUY3 354 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 SIGLEC10Q96LC7 697 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 TMEM191AQ9H0A3 160 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 GSTO2Q9H4Y5 243 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 PITPNC1Q9UKF7 332 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 PDCD11Q14690 1871 aaKnown RBP12.37□□□□□ -0.43
USP49-203ENST00000394253 A0A1W2PNV4 684 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 OR52A4PA6NMU1 304 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 SLC25A4P12235 298 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 PTHLHP12272 177 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 ITGB7P26010 798 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 ZNF468Q5VIY5 522 aaPredicted RBP12.37□□□□□ -0.43
USP49-203ENST00000394253 OR4A47Q6IF82 309 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 LCN15Q6UWW0 184 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 CLECL1Q8IZS7 167 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 OR4A4PQ8NGN8 299 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 COMMD5Q9GZQ3 224 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 MEGF6O75095 1541 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 DOCK3Q8IZD9 2030 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 FREM1Q5H8C1 2179 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 CCSO14618 274 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 ANKRD34CP0C6C1 535 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 TBC1D28Q2M2D7 210 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 ZBTB37Q5TC79 503 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 TMEM268Q5VZI3 342 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 RPL3LQ92901 407 aaKnown RBP12.37□□□□□ -0.43
USP49-203ENST00000394253 NTPCRQ9BSD7 190 aaKnown RBP12.37□□□□□ -0.43
USP49-203ENST00000394253 SLC22A13Q9Y226 551 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 GALR3O60755 368 aaPredicted RBP12.37□□□□□ -0.43
USP49-203ENST00000394253 DUS4LO95620 317 aaKnown RBP12.37□□□□□ -0.43
USP49-203ENST00000394253 ZNF140P52738 457 aaPredicted RBP12.37□□□□□ -0.43
USP49-203ENST00000394253 ZNF595Q8IYB9 648 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 ABHD4Q8TB40 342 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 DMRT3Q9NQL9 472 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 MARCH5Q9NX47 278 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 WDR1O75083 606 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 CDC34P49427 236 aaPredicted RBP12.37□□□□□ -0.43
USP49-203ENST00000394253 GP2P55259 537 aaKnown RBP12.37□□□□□ -0.43
USP49-203ENST00000394253 ZNF628Q5EBL2 1059 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 NXNL2Q5VZ03 156 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 LRIT1Q9P2V4 623 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 ECM29Q5VYK3 1845 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 DGAT2L7PQ6IED9 249 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 VASH2Q86V25 355 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 CMTM8Q8IZV2 173 aa12.37□□□□□ -0.43
USP49-203ENST00000394253 PAPLNO95428 1278 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 LY86O95711 162 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 CALCBP10092 127 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 DLX1P56177 255 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 TIMD4Q96H15 378 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 ABHD16AO95870 558 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 OPN1MWP04001 364 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 OPN1MW2P0DN77 364 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 OPN1MW3P0DN78 364 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 SDHAP31040 664 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 MMP15P51511 669 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 HHEXQ03014 270 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 SLC46A1Q96NT5 459 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 TIAM2Q8IVF5 1701 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 POM121BA6NF01 834 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 HOXC11O43248 304 aaPredicted RBP12.36□□□□□ -0.43
USP49-203ENST00000394253 EDDM3BP56851 147 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 NOGQ13253 232 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 ZNF429Q86V71 674 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 OR2AK2Q8NG84 335 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 POU3F3P20264 500 aaPredicted RBP12.36□□□□□ -0.43
USP49-203ENST00000394253 FDXRP22570 491 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 RXFP4Q8TDU9 374 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 MRPS16Q9Y3D3 137 aaKnown RBP12.36□□□□□ -0.43
USP49-203ENST00000394253 DISP1Q96F81 1524 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 ACOD1A6NK06 481 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 RAB27BO00194 218 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 ZNF25P17030 456 aaPredicted RBP12.36□□□□□ -0.43
USP49-203ENST00000394253 MLF2Q15773 248 aaPredicted RBP12.36□□□□□ -0.43
USP49-203ENST00000394253 TOMM34Q15785 309 aaPredicted RBP12.36□□□□□ -0.43
USP49-203ENST00000394253 CYS1Q717R9 158 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 SLC35A4Q96G79 324 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 SLC35B3Q9H1N7 401 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 ZNF835Q9Y2P0 537 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 PLXNB1O43157 2135 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 NEURL1O76050 574 aa12.36□□□□□ -0.43
USP49-203ENST00000394253 RBP2P50120 134 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms