RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 TRAV6A0A075B6T7 132 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 TRBV6-6A0A0A6YYG2 114 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 A0A1B0GVY2 172 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 ZNF701M0R085 212 aaPredicted RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 RAD51CO43502 376 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 ZNF861PO60384 105 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 CA11O75493 328 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 FLOT1O75955 427 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 HPRT1P00492 218 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 IGLV2-23P01705 113 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 HLA-DPB1P04440 258 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 FABP3P05413 133 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 DCNP07585 359 aaKnown RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 UBTFL6P0CB48 400 aaPredicted RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 ZNF17P17021 662 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 ATF6P18850 670 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 RAB3AP20336 220 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 MDKP21741 143 aaPredicted RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 U2AF2P26368 475 aaKnown RBP eCLIP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 OR1E1P30953 314 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 GPR1P46091 355 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 CSNK1A1P48729 337 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 SLC11A1P49279 550 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 UBE2AP49459 152 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 CRISP1P54107 249 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 ZNF121P58317 390 aaPredicted RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 ILKQ13418 452 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 ART3Q13508 389 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 STK38Q15208 465 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 ZNF726P1Q15940 193 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 KCTD19Q17RG1 926 aaPredicted RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 C2orf83Q53S99 150 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 SPECC1LQ69YQ0 1117 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 CYB5R2Q6BCY4 276 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 RWDD4Q6NW29 188 aaKnown RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 ARL9Q6T311 187 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 MBOAT2Q6ZWT7 520 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 ABHD12BQ7Z5M8 362 aaPredicted RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 MRPL55Q7Z7F7 128 aaKnown RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 LINC01551Q86U37 167 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 STPG2Q8N412 459 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 CHST4Q8NCG5 386 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 OR5T3Q8NGG3 340 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 NUBPLQ8TB37 319 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 NAT6Q93015 286 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 IL22RA2Q969J5 263 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 LRRC58Q96CX6 371 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 RNF185Q96GF1 192 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 SLC25A2Q9BXI2 301 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 CDC42EP4Q9H3Q1 356 aaKnown RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 C8orf33Q9H7E9 229 aaPredicted RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 RETNQ9HD89 108 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 MYOZ2Q9NPC6 264 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 SLCO1B3Q9NPD5 702 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 DYRK4Q9NR20 520 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 MYEF2Q9P2K5 600 aaKnown RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 CTSFQ9UBX1 484 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 OR12D3Q9UGF7 316 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 TRMT112Q9UI30 125 aaKnown RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 ST3GAL6Q9Y274 331 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 RCL1Q9Y2P8 373 aaKnown RBP1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 KIF27Q86VH2 1401 aa1.98□□□□□ -2.09
TRAJ40-201ENST00000390497 RAI1Q7Z5J4 1906 aaPredicted RBP1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 IGLV1-50A0A075B6I6 118 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 IGHV3-74A0A0B4J1X5 117 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 IGHV3-66A0A0C4DH42 116 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 CIB4A0PJX0 185 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 OR6C74A6NCV1 312 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 TEX46H3BTG2 121 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 SLC25A14O95258 325 aaPredicted RBP1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 FARS2O95363 451 aaKnown RBP1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 SNAI1O95863 264 aaPredicted RBP1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 TACSTD2P09758 323 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 ERGP11308 486 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 GFAPP14136 432 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 SRMP19623 302 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 RPS10P46783 165 aaKnown RBP1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 OR1G1P47890 313 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 NCBP2P52298 156 aaKnown RBP eCLIP1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 CRISP3P54108 245 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 KRTAP10-6P60371 365 aaPredicted RBP1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 UBE2NP61088 152 aaKnown RBP1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 IRF8Q02556 426 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 REG3AQ06141 175 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 ZNF33AQ06730 810 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 TFDP2Q14188 446 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 GGTLC2Q14390 218 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 PSG5Q15238 335 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 ZSCAN26Q16670 478 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 TRMT5Q32P41 509 aaKnown RBP1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 PTPN20Q4JDL3 420 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 HIKESHIQ53FT3 197 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 TPRG1LQ5T0D9 272 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 GPR107Q5VW38 600 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 MRPL21Q7Z2W9 205 aaKnown RBP1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 LINC00523Q86TU6 105 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 CMTM8Q8IZV2 173 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 NPWQ8N729 165 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 ARIH2OSQ8N7S6 290 aa1.97□□□□□ -2.09
TRAJ40-201ENST00000390497 Q8N976 141 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms