RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 TDGF1P3P51864 188 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 CD163Q86VB7 1156 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 KDF1Q8NAX2 398 aaPredicted RBP23.61■■□□□ 1.37
MSX1-201ENST00000382723 GHSRQ92847 366 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 SH3GL3Q99963 347 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 PRSS50Q9UI38 385 aa23.61■■□□□ 1.37
MSX1-201ENST00000382723 ZNF587BE7ETH6 402 aa23.6■■□□□ 1.37
MSX1-201ENST00000382723 NPR2P20594 1047 aa23.6■■□□□ 1.37
MSX1-201ENST00000382723 RIDAP52758 137 aaKnown RBP23.6■■□□□ 1.37
MSX1-201ENST00000382723 INSL4Q14641 139 aa23.6■■□□□ 1.37
MSX1-201ENST00000382723 OR10S1Q8NGN2 331 aa23.6■■□□□ 1.37
MSX1-201ENST00000382723 RNF133Q8WVZ7 376 aa23.6■■□□□ 1.37
MSX1-201ENST00000382723 SMIM19Q96E16 107 aa23.6■■□□□ 1.37
MSX1-201ENST00000382723 PGLYRP3Q96LB9 341 aa23.6■■□□□ 1.37
MSX1-201ENST00000382723 DCLRE1CQ96SD1 692 aaKnown RBP23.6■■□□□ 1.37
MSX1-201ENST00000382723 SIAEQ9HAT2 523 aa23.6■■□□□ 1.37
MSX1-201ENST00000382723 TRIM64BA6NI03 449 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 H2BFMP0C1H6 154 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 ABOP16442 354 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 TGM4P49221 684 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 FAPQ12884 760 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 FAM27BQ5VT28 67 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 NSUN5P2Q63ZY6 315 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.59■■□□□ 1.37
MSX1-201ENST00000382723 EGFL6Q8IUX8 553 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 PDCD1LG2Q9BQ51 273 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 ASF1BQ9NVP2 202 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 PTTG2Q9NZH5 202 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 FBXL3Q9UKT7 428 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 CD8B2A6NJW9 211 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 CD8BP10966 210 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 ZNF182P17025 639 aaPredicted RBP23.59■■□□□ 1.37
MSX1-201ENST00000382723 C22orf42Q6IC83 251 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 CNEP1R1Q8N9A8 125 aa23.59■■□□□ 1.37
MSX1-201ENST00000382723 TXNL4BQ9NX01 149 aaKnown RBP23.59■■□□□ 1.37
MSX1-201ENST00000382723 DSPP15924 2871 aaKnown RBP23.58■■□□□ 1.37
MSX1-201ENST00000382723 HLA-DPB1P04440 258 aa23.58■■□□□ 1.37
MSX1-201ENST00000382723 OPRL1P41146 370 aa23.58■■□□□ 1.37
MSX1-201ENST00000382723 FOXG1P55316 489 aaPredicted RBP23.58■■□□□ 1.37
MSX1-201ENST00000382723 MRPL28Q13084 256 aaKnown RBP23.58■■□□□ 1.37
MSX1-201ENST00000382723 SF3B4Q15427 424 aaKnown RBP eCLIP23.58■■□□□ 1.37
MSX1-201ENST00000382723 GDPGP1Q6ZNW5 385 aa23.58■■□□□ 1.37
MSX1-201ENST00000382723 FAM214BQ7L5A3 538 aa23.58■■□□□ 1.37
MSX1-201ENST00000382723 SLC25A18Q9H1K4 315 aa23.58■■□□□ 1.37
MSX1-201ENST00000382723 FRRS1LQ9P0K9 344 aa23.58■■□□□ 1.37
MSX1-201ENST00000382723 GTF2A1LQ9UNN4 478 aa23.58■■□□□ 1.37
MSX1-201ENST00000382723 EMC9Q9Y3B6 208 aa23.58■■□□□ 1.37
MSX1-201ENST00000382723 PHF3Q92576 2039 aaKnown RBP23.58■■□□□ 1.37
MSX1-201ENST00000382723 GABRA1P14867 456 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 ARF1P84077 181 aaKnown RBP23.57■■□□□ 1.36
MSX1-201ENST00000382723 ALKBH1Q13686 389 aaKnown RBP23.57■■□□□ 1.36
MSX1-201ENST00000382723 KLHL24Q6TFL4 600 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 ZNF813Q6ZN06 617 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 SLC22A24Q8N4F4 322 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 FAM57AQ8TBR7 257 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 FBXO17Q96EF6 278 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 SLX1AQ9BQ83 275 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 FIGNL2A6NMB9 653 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 RPL36A-HNRNPH2H7BZ11 118 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 GABRPO00591 440 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 WDR1O75083 606 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 RTL6Q6ICC9 239 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 OR2A2Q6IF42 318 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 CD200R1LQ6Q8B3 271 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 C3P1Q6ZMU1 363 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 OR13C5Q8NGS8 318 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 OR2G2Q8NGZ5 317 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 HAVCR2Q8TDQ0 301 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 DCSTAMPQ9H295 470 aa23.57■■□□□ 1.36
MSX1-201ENST00000382723 TRDV1A0A1B0GX56 115 aa23.56■■□□□ 1.36
MSX1-201ENST00000382723 HSPB2A8KAH6 182 aa23.56■■□□□ 1.36
MSX1-201ENST00000382723 ZNF254O75437 659 aa23.56■■□□□ 1.36
MSX1-201ENST00000382723 RGS9O75916 674 aaPredicted RBP23.56■■□□□ 1.36
MSX1-201ENST00000382723 PNPP00491 289 aa23.56■■□□□ 1.36
MSX1-201ENST00000382723 CD53P19397 219 aa23.56■■□□□ 1.36
MSX1-201ENST00000382723 OR3A2P47893 321 aa23.56■■□□□ 1.36
MSX1-201ENST00000382723 SERPINB10P48595 397 aa23.56■■□□□ 1.36
MSX1-201ENST00000382723 MFGE8Q08431 387 aaPredicted RBP23.56■■□□□ 1.36
MSX1-201ENST00000382723 TAF13Q15543 124 aa23.56■■□□□ 1.36
MSX1-201ENST00000382723 HSPB2Q16082 182 aa23.56■■□□□ 1.36
MSX1-201ENST00000382723 GFRALQ6UXV0 394 aa23.56■■□□□ 1.36
MSX1-201ENST00000382723 PRSS35Q8N3Z0 413 aa23.56■■□□□ 1.36
MSX1-201ENST00000382723 ZNF878C9JN71 531 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 DVL2O14641 736 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 PER3P56645 1201 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 KLRB1Q12918 225 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 GUSBP1Q15486 140 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 ODF4Q2M2E3 257 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 C1orf185Q5T7R7 199 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 FBXW9Q5XUX1 488 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 DEGS2Q6QHC5 323 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 TMEM91Q6ZNR0 172 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 SEM1Q6ZVN7 128 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 USP43Q70EL4 1123 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 GJC3Q8NFK1 279 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 ABHD4Q8TB40 342 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 PNRC2Q9NPJ4 139 aaKnown RBP23.55■■□□□ 1.36
MSX1-201ENST00000382723 FAM215AQ9Y5M1 114 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 ZFPL1O95159 310 aa23.55■■□□□ 1.36
MSX1-201ENST00000382723 CST2P09228 141 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms