RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 RAB1CQ92928 201 aa11.99□□□□□ -0.49
SHOX-202ENST00000381575 TIMD4Q96H15 378 aa11.99□□□□□ -0.49
SHOX-202ENST00000381575 KCTD14Q9BQ13 255 aaPredicted RBP11.99□□□□□ -0.49
SHOX-202ENST00000381575 TMPRSS13Q9BYE2 586 aa11.99□□□□□ -0.49
SHOX-202ENST00000381575 NMNAT1Q9HAN9 279 aaPredicted RBP11.99□□□□□ -0.49
SHOX-202ENST00000381575 GRHPRQ9UBQ7 328 aa11.99□□□□□ -0.49
SHOX-202ENST00000381575 EGFL7Q9UHF1 273 aa11.99□□□□□ -0.49
SHOX-202ENST00000381575 C12orf71A8MTZ7 269 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 SOCS2O14508 198 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 XKRYO14609 159 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 KRR1Q13601 381 aaKnown RBP11.98□□□□□ -0.49
SHOX-202ENST00000381575 C8orf82Q6P1X6 216 aaPredicted RBP11.98□□□□□ -0.49
SHOX-202ENST00000381575 TMPRSS11FQ6ZWK6 438 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 VASH1Q7L8A9 365 aaPredicted RBP11.98□□□□□ -0.49
SHOX-202ENST00000381575 FAM122BQ7Z309 247 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 FAM86B1Q8N7N1 296 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 FNDC8Q8TC99 324 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 DCLRE1CQ96SD1 692 aaKnown RBP11.98□□□□□ -0.49
SHOX-202ENST00000381575 EGLN1Q9GZT9 426 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 SYT4Q9H2B2 425 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 CCDC134Q9H6E4 229 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 ELOVL3Q9HB03 270 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 AP3M1Q9Y2T2 418 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 STARD10Q9Y365 291 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 ENPP4Q9Y6X5 453 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 V9GYQ6 96 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 MGAM2Q2M2H8 2515 aa11.98□□□□□ -0.49
SHOX-202ENST00000381575 PKD1L1Q8TDX9 2849 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 A0A0G2JMP0 313 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 TRBV4-1A0A0J9YWV2 114 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 A0A0X1KG70 313 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 PRSS37A4D1T9 235 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 HTR3EA5X5Y0 456 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 SGCEO43556 437 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 DBHP09172 617 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 ANPEPP15144 967 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 ARHGDIAP52565 204 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 TNFAIP6P98066 277 aaPredicted RBP11.97□□□□□ -0.49
SHOX-202ENST00000381575 SEC23BQ15437 767 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 MTX3Q5HYI7 312 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 DCAF12L2Q5VW00 463 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 UNQ6126/PRO20091Q6UXV3 157 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 Q6ZR03 302 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 PTCHD4Q6ZW05 846 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 RRM2BQ7LG56 351 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 CYP4Z1Q86W10 505 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 RNF113BQ8IZP6 322 aaKnown RBP11.97□□□□□ -0.49
SHOX-202ENST00000381575 RNF148Q8N7C7 305 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 OR2Z1Q8NG97 314 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 OR4M2Q8NGB6 313 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 C22orf15Q8WYQ4 148 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 SLC6A7Q99884 636 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 PLEK2Q9NYT0 353 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 KLHL21Q9UJP4 597 aa11.97□□□□□ -0.49
SHOX-202ENST00000381575 NDRG4Q9ULP0 352 aaKnown RBP11.97□□□□□ -0.49
SHOX-202ENST00000381575 COA3Q9Y2R0 106 aaPredicted RBP11.97□□□□□ -0.49
SHOX-202ENST00000381575 SLC16A7O60669 478 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 ICMTO60725 284 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 H1F0P07305 194 aaKnown RBP11.96□□□□□ -0.49
SHOX-202ENST00000381575 ZFP36P26651 326 aaKnown RBP11.96□□□□□ -0.49
SHOX-202ENST00000381575 MDH1P40925 334 aaKnown RBP11.96□□□□□ -0.49
SHOX-202ENST00000381575 LIMS1P48059 325 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 FXYD6P3P58550 94 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 PSME3P61289 254 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 ACTG1P63261 375 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 SCRN3Q0VDG4 424 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 MEP1BQ16820 701 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 ANKDD1AQ495B1 522 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 C1QL2Q7Z5L3 287 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 OR5AS1Q8N127 324 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 OR52J3Q8NH60 311 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 ZNF418Q8TF45 676 aaPredicted RBP11.96□□□□□ -0.49
SHOX-202ENST00000381575 CMBLQ96DG6 245 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 RSRC1Q96IZ7 334 aaKnown RBP11.96□□□□□ -0.49
SHOX-202ENST00000381575 TSSK2Q96PF2 358 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 HOPXQ9BPY8 73 aaPredicted RBP11.96□□□□□ -0.49
SHOX-202ENST00000381575 EFCAB1Q9HAE3 211 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 CYSLTR2Q9NS75 346 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 NDUFAF4Q9P032 175 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 ASH2LQ9UBL3 628 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 PURGQ9UJV8 347 aaKnown RBP11.96□□□□□ -0.49
SHOX-202ENST00000381575 PCDHB10Q9UN67 800 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 SIGLEC7Q9Y286 467 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 TMEM5Q9Y2B1 443 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 IER3IP1Q9Y5U9 82 aa11.96□□□□□ -0.49
SHOX-202ENST00000381575 H3BSA7 217 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 RER1O15258 196 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 CCDC22O60826 627 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 NDUFB2O95178 105 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 ADH4P08319 380 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 SBK2P0C263 348 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 GSTM3P21266 225 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 SDHAP31040 664 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 CENPAP49450 140 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 PRSS12P56730 875 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 SEC61A1P61619 476 aaKnown RBP11.95□□□□□ -0.5
SHOX-202ENST00000381575 CDK5R2Q13319 367 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 HLXQ14774 488 aaPredicted RBP11.95□□□□□ -0.5
SHOX-202ENST00000381575 CCDC92Q53HC0 331 aaPredicted RBP11.95□□□□□ -0.5
SHOX-202ENST00000381575 ARL9Q6T311 187 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms