RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 IFITM5A6NNB3 132 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 CSNK1A1P48729 337 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 CLDN15P56746 228 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 RIN1Q13671 783 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 TAB1Q15750 504 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 PHYHD1Q5SRE7 291 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 Q8N402 240 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 DTX3Q8N9I9 347 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 OR4M1Q8NGD0 313 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 OR10S1Q8NGN2 331 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 OR6N1Q8NGY5 312 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 SETD6Q8TBK2 473 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 TSEN15Q8WW01 171 aaKnown RBP17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 TMEM54Q969K7 222 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 ADGRG7Q96K78 797 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 CELSR3Q9NYQ7 3312 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 TRAV8-7A0A075B6U6 113 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 A0A1B0GVC2 190 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 A6NIN4 97 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 ARGFXA6NJG6 315 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 CXCL13O43927 109 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 ADRA2CP18825 462 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 POU3F2P20265 443 aaPredicted RBP17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 HES5Q5TA89 166 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 ASB18Q6ZVZ8 466 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 LRRTM1Q86UE6 522 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 TMEM123Q8N131 208 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 SNRNP27Q8WVK2 155 aaKnown RBP17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 PRRX2Q99811 253 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 SF3B5Q9BWJ5 86 aaKnown RBP17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 ZNF703Q9H7S9 590 aaPredicted RBP17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 G6PC2Q9NQR9 355 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 RHBDL2Q9NX52 303 aa17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 GDF2Q9UK05 429 aaPredicted RBP17.6■□□□□ 0.41
PDLIM5-205ENST00000380180 A0A0G2JMP0 313 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 A0A0X1KG70 313 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 LINC00854A0A1B0GVQ3 168 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 TMEM269A0A1B0GVZ9 245 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 AIPO00170 330 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 APOA1P02647 267 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 NR2C1P13056 603 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 TALDO1P37837 337 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 SELENOPP49908 381 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 KCNMB1Q16558 191 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 CFAP77Q6ZQR2 320 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 VASH2Q86V25 355 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 OR4M2Q8NGB6 313 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 OR2AJ1Q8NGZ0 328 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 OR10D3Q8NH80 312 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 OR2V1Q8NHB1 315 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 ROBO4Q8WZ75 1007 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 ZNF775Q96BV0 537 aaPredicted RBP17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 LRFN3Q9BTN0 628 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 OR52A1Q9UKL2 312 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 SPATA2Q9UM82 520 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 CLEC4AQ9UMR7 237 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 POLR1DQ9Y2S0 133 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 SSX4O60224 188 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 MAS1P04201 325 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 CCBE1Q6UXH8 406 aaPredicted RBP17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 ZNF671Q8TAW3 534 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.59■□□□□ 0.413e-8■■■□□ 14.8
PDLIM5-205ENST00000380180 B4GALT7Q9UBV7 327 aa17.59■□□□□ 0.41
PDLIM5-205ENST00000380180 ZFHX2Q9C0A1 2572 aaPredicted RBP17.58■□□□□ 0.41
PDLIM5-205ENST00000380180 MUC6Q6W4X9 2439 aa17.58■□□□□ 0.41
PDLIM5-205ENST00000380180 DOK2O60496 412 aa17.58■□□□□ 0.4
PDLIM5-205ENST00000380180 HPNP05981 417 aa17.58■□□□□ 0.4
PDLIM5-205ENST00000380180 CELA3AP09093 270 aa17.58■□□□□ 0.4
PDLIM5-205ENST00000380180 CSRP1P21291 193 aaKnown RBP17.58■□□□□ 0.4
PDLIM5-205ENST00000380180 AGAP7PQ5VUJ5 663 aa17.58■□□□□ 0.4
PDLIM5-205ENST00000380180 THRSPQ92748 146 aa17.58■□□□□ 0.4
PDLIM5-205ENST00000380180 AGAP4Q96P64 663 aa17.58■□□□□ 0.4
PDLIM5-205ENST00000380180 TTTY12Q9BZ98 90 aa17.58■□□□□ 0.4
PDLIM5-205ENST00000380180 ASH2LQ9UBL3 628 aa17.58■□□□□ 0.4
PDLIM5-205ENST00000380180 RTTNQ86VV8 2226 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 SLC43A1O75387 559 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 SP1P08047 785 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 MMP16P51512 607 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 ZNF133P52736 654 aaPredicted RBP17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 SRSF6Q13247 344 aaKnown RBP17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 C10orf128Q5T292 105 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 GALNTL5Q7Z4T8 443 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 NRARPQ7Z6K4 114 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 MDS2Q8NDY4 140 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 DNAAF1Q8NEP3 725 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 LGALS14Q8TCE9 139 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 ASB5Q8WWX0 329 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 KCNJ15Q99712 375 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 OR5H15A6NDH6 313 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 ZNF716A6NP11 495 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 FAM166BA8MTA8 275 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 LINC01387J3KSC0 135 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 LIPCP11150 499 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 MAGEA5P43359 124 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 PITPNBP48739 271 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 SGCAQ16586 387 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 KLHL24Q6TFL4 600 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 FAM206AQ9NX38 181 aa17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 FOXD3Q9UJU5 478 aaPredicted RBP17.57■□□□□ 0.4
PDLIM5-205ENST00000380180 DHDHQ9UQ10 334 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms