RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 CSF3RQ99062 836 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 MS4A8Q9BY19 250 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 FGF22Q9HCT0 170 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 SDR39U1Q9NRG7 319 aaPredicted RBP12.89□□□□□ -0.35
TRIM13-202ENST00000378182 TREX1Q9NSU2 369 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 ARL2-SNX15V9GYD0 113 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 SCN3AQ9NY46 2000 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 IGKV3-7A0A075B6H7 116 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 GFERP55789 205 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 C5orf46Q6UWT4 87 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 SHISA4Q96DD7 197 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 SLC22A11Q9NSA0 550 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 C5P01031 1676 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 SMLR1H3BR10 107 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 OR2T7P0C7T2 308 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 RHOBP62745 196 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 SMN1Q16637 294 aaKnown RBP12.89□□□□□ -0.35
TRIM13-202ENST00000378182 OR10V1Q8NGI7 309 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 OR1J1Q8NGS3 322 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 OR2T6Q8NHC8 308 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 DCAF16Q9NXF7 216 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 C20orf202A1L168 122 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 SLC16A6O15403 523 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 WDR1O75083 606 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 CRYABP02511 175 aaKnown RBP12.89□□□□□ -0.35
TRIM13-202ENST00000378182 RAB40ALP0C0E4 278 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 ELAVL1Q15717 326 aaKnown RBP12.89□□□□□ -0.35
TRIM13-202ENST00000378182 PHYHD1Q5SRE7 291 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 ADGRG3Q86Y34 549 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 SLC30A7Q8NEW0 376 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 OR2AK2Q8NG84 335 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 TERB2Q8NHR7 220 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 RAB40AQ8WXH6 277 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 CHST8Q9H2A9 424 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 SLC17A4Q9Y2C5 497 aa12.89□□□□□ -0.35
TRIM13-202ENST00000378182 LRIT2A6NDA9 550 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 DSCR3O14972 297 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 NAGAP17050 411 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 S100A4P26447 101 aaKnown RBP12.88□□□□□ -0.35
TRIM13-202ENST00000378182 CDC34P49427 236 aaPredicted RBP12.88□□□□□ -0.35
TRIM13-202ENST00000378182 OR1C1Q15619 314 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 ZNF77Q15935 545 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 STUMQ69YW2 141 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 ALKAL2Q6UX46 152 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 TMEM182Q6ZP80 229 aaPredicted RBP12.88□□□□□ -0.35
TRIM13-202ENST00000378182 GRINAQ7Z429 371 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 NLRP8Q86W28 1048 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 ACY3Q96HD9 319 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 NUDT9Q9BW91 350 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 SLCO1B1Q9Y6L6 691 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 BTAF1O14981 1849 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 PPP2CBP62714 309 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 PPP2CAP67775 309 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 DUSP5Q16690 384 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 OR2I1PQ8NGU4 316 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 APH1BQ8WW43 257 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 FGF14Q92915 247 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 TAAR9Q96RI9 348 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 ARPC5LQ9BPX5 153 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 TIMM10BQ9Y5J6 103 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 UBBP0CG47 229 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 CDAP32320 146 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 TAGLN2P37802 199 aaKnown RBP12.88□□□□□ -0.35
TRIM13-202ENST00000378182 RPS27AP62979 156 aaKnown RBP12.88□□□□□ -0.35
TRIM13-202ENST00000378182 UBA52P62987 128 aaKnown RBP12.88□□□□□ -0.35
TRIM13-202ENST00000378182 SRSF5Q13243 272 aaKnown RBP12.88□□□□□ -0.35
TRIM13-202ENST00000378182 DOC2BQ14184 412 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 CD300LGQ6UXG3 332 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 Q6ZS52 159 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 FAM58AQ8N1B3 248 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 GPR119Q8TDV5 335 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 Q96M85 177 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 LRFN3Q9BTN0 628 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 METTL17Q9H7H0 456 aaPredicted RBP12.88□□□□□ -0.35
TRIM13-202ENST00000378182 HES4Q9HCC6 221 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 FAM212BQ9NTI7 297 aaPredicted RBP12.88□□□□□ -0.35
TRIM13-202ENST00000378182 CCSO14618 274 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 ITGAMP11215 1152 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 CST5P28325 142 aaPredicted RBP12.88□□□□□ -0.35
TRIM13-202ENST00000378182 HAAOP46952 286 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 Q1RN00 199 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 TRGV5A0A0B4J1U4 118 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 NRASP01111 189 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 B4GALT1P15291 398 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 COX7A1P24310 79 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 GABRB3P28472 473 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 KDM4DQ6B0I6 523 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 LAIR1Q6GTX8 287 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 FRMPD2BQ6IN97 320 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 C17orf78Q8N4C9 275 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 SLCO2B1O94956 709 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 MRPL19P49406 292 aaKnown RBP12.88□□□□□ -0.35
TRIM13-202ENST00000378182 RBMS2Q15434 407 aaKnown RBP12.88□□□□□ -0.35
TRIM13-202ENST00000378182 PYCR3Q53H96 274 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 PLA2G12AQ9BZM1 189 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 LPAR2Q9HBW0 351 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 ASH2LQ9UBL3 628 aa12.88□□□□□ -0.35
TRIM13-202ENST00000378182 LOC100289279A0A1B0GTE1 492 aa12.87□□□□□ -0.35
TRIM13-202ENST00000378182 TSTD3H0UI37 97 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms