RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ANKRD61A6NGH8 418 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 ZGLP1P0C6A0 271 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 MSMO1Q15800 293 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 LIPNQ5VXI9 398 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 TMEM92Q6UXU6 159 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 LINC01555Q8NAE3 123 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 OR4K15Q8NH41 348 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 KCNG3Q8TAE7 436 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 IL1F10Q8WWZ1 152 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 UCN3Q969E3 161 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 ZG16BQ96DA0 208 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 OR2A14Q96R47 310 aa13.69□□□□□ -0.22
NPHP4-201ENST00000378156 CMSS1Q9BQ75 279 aaKnown RBP13.69□□□□□ -0.22
NPHP4-201ENST00000378156 D6RAR5 112 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 ZNF587BE7ETH6 402 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 AIPO00170 330 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 GPR85P60893 370 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 DGCR2P98153 550 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 TIGD3Q6B0B8 471 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 NPSR1Q6W5P4 371 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 GLCCI1Q86VQ1 547 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 GCDHQ92947 438 aaPredicted RBP13.68□□□□□ -0.22
NPHP4-201ENST00000378156 ZMAT3Q9HA38 289 aaKnown RBP13.68□□□□□ -0.22
NPHP4-201ENST00000378156 ISYNA1Q9NPH2 558 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 SERTAD4Q9NUC0 356 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 PCDHGA1Q9Y5H4 931 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 A0A0B4J203 849 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 OR2W5A6NFC9 320 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 ICOSLGO75144 302 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 SCAF4O95104 1147 aaKnown RBP13.68□□□□□ -0.22
NPHP4-201ENST00000378156 MYF5P13349 255 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 PNLIPRP2P54317 469 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 SRPXP78539 464 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 SLC9A3R2Q15599 337 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 OR5M1Q8NGP8 315 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 SGK3Q96BR1 496 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 UPRTQ96BW1 309 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 SEC22CQ9BRL7 303 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 OR52A1Q9UKL2 312 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 PRSS44E7EML9 344 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 PAPLNO95428 1278 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 OR5D18Q8NGL1 313 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 SDHAF2Q9NX18 166 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 MDFIC2A0A1B0GVS7 189 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 ZNF814B7Z6K7 855 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 POU2F2P09086 479 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 CD300CQ08708 224 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 HLA-BQ31612 363 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 STEAP1BQ6NZ63 245 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 NIPSNAP3BQ9BS92 247 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 SLC22A11Q9NSA0 550 aa13.68□□□□□ -0.22
NPHP4-201ENST00000378156 COL9A1P20849 921 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 HSF1Q00613 529 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 SSX1Q16384 188 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 ACKR1Q16570 336 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 ARIH2OSQ8N7S6 290 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 PSMF1Q92530 271 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 DVL3Q92997 716 aaPredicted RBP13.67□□□□□ -0.22
NPHP4-201ENST00000378156 FGGYQ96C11 551 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 OR11A1Q9GZK7 315 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 C20orf85Q9H1P6 137 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 CHST11Q9NPF2 352 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 MRPS28Q9Y2Q9 187 aaKnown RBP13.67□□□□□ -0.22
NPHP4-201ENST00000378156 SPTA1P02549 2419 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 TMEM200CA6NKL6 621 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 C1QCP02747 245 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 TK1P04183 234 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 SDHAP31040 664 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 HMGA2P52926 109 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 YRDCQ86U90 279 aaKnown RBP13.67□□□□□ -0.22
NPHP4-201ENST00000378156 SLC22A24Q8N4F4 322 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 PLPP7Q8NBV4 271 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 ST8SIA1Q92185 356 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 CCDC74BQ96LY2 380 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 C10orf90Q96M02 699 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 DCBLD2Q96PD2 775 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 TSSK2Q96PF2 358 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 ZNF286AQ9HBT8 521 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 C20orf202A1L168 122 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 C5orf67F2Z3F1 127 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 MBTPS2O43462 519 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 GIPP09681 153 aaPredicted RBP13.67□□□□□ -0.22
NPHP4-201ENST00000378156 HOXB3P14651 431 aaPredicted RBP13.67□□□□□ -0.22
NPHP4-201ENST00000378156 FZD2Q14332 565 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 TCTN1Q2MV58 587 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 MAML2Q8IZL2 1156 aaPredicted RBP13.67□□□□□ -0.22
NPHP4-201ENST00000378156 RAB3CQ96E17 227 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 WDR34Q96EX3 536 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 ARRDC1-AS1Q9H2J1 176 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 FKRPQ9H9S5 495 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 GPR55Q9Y2T6 319 aaPredicted RBP13.67□□□□□ -0.22
NPHP4-201ENST00000378156 LOXL2Q9Y4K0 774 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 KPTNQ9Y664 436 aa13.67□□□□□ -0.22
NPHP4-201ENST00000378156 FAM166BA8MTA8 275 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 RPS27P42677 84 aaKnown RBP13.66□□□□□ -0.22
NPHP4-201ENST00000378156 OR10K2Q6IF99 312 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 FBXW12Q6X9E4 464 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 SEC22AQ96IW7 307 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 IP6K3Q96PC2 410 aa13.66□□□□□ -0.22
NPHP4-201ENST00000378156 GABRG3Q99928 467 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms