RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 KRCC1Q9NPI7 259 aaPredicted RBP16.28■□□□□ 0.2
CBWD3-204ENST00000377349 TIMM10BQ9Y5J6 103 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 CACNG2Q9Y698 323 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 PLSCR5A0PG75 271 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 TMEM89A2RUT3 159 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 C12orf71A8MTZ7 269 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 SOCS2O14508 198 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 ATP8B1O43520 1251 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 SPRY3O43610 288 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 PLPP2O43688 288 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 SNX3O60493 162 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 EPHA1P21709 976 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 PRDX6P30041 224 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 MPV17P39210 176 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 SPIBQ01892 262 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 MVKQ03426 396 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 PCGF3Q3KNV8 242 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 ZNF718Q3SXZ3 478 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 SHQ1Q6PI26 577 aaKnown RBP16.28■□□□□ 0.2
CBWD3-204ENST00000377349 UNQ6126/PRO20091Q6UXV3 157 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 RFPL4BQ6ZWI9 263 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 TMPRSS11FQ6ZWK6 438 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 SLC25A40Q8TBP6 338 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 FAM216AQ8WUB2 273 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 POM121L2Q96KW2 1035 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 OR2J1Q9GZK6 312 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 POLE4Q9NR33 117 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 NDUFAF4Q9P032 175 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 PCDHB10Q9UN67 800 aa16.28■□□□□ 0.2
CBWD3-204ENST00000377349 TRBV4-1A0A0J9YWV2 114 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 WIPF1O43516 503 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 DOK2O60496 412 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 NDUFB2O95178 105 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 ZNF26P17031 533 aaPredicted RBP16.27■□□□□ 0.19
CBWD3-204ENST00000377349 RHCEP18577 417 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 ZNF81P51508 661 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 MOGQ16653 247 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 ACSM5Q6NUN0 579 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 TSEN54Q7Z6J9 526 aaKnown RBP16.27■□□□□ 0.19
CBWD3-204ENST00000377349 ZNF418Q8TF45 676 aaPredicted RBP16.27■□□□□ 0.19
CBWD3-204ENST00000377349 SYT4Q9H2B2 425 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 ANKRD19PQ9H560 264 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 SAP30LQ9HAJ7 183 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 DCAF13Q9NV06 445 aaKnown RBP16.27■□□□□ 0.19
CBWD3-204ENST00000377349 POLR1DQ9Y2S0 133 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 WIPI2Q9Y4P8 454 aa16.27■□□□□ 0.19
CBWD3-204ENST00000377349 IGHV1-69-2A0A0G2JMI3 117 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 PRSS37A4D1T9 235 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 UNC119BA6NIH7 251 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 SLC16A7O60669 478 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 MPZL1O95297 269 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 ABHD16AO95870 558 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 IGHV3-13P01766 116 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 IGHV2-5P01817 119 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 SCG5P05408 212 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 EGR1P18146 543 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 HTR5AP47898 357 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 ARHGDIAP52565 204 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 PPP1CBP62140 327 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 ACTG1P63261 375 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 ENDOGQ14249 297 aaKnown RBP16.26■□□□□ 0.19
CBWD3-204ENST00000377349 SEC23BQ15437 767 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 C1orf94Q6P1W5 598 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 USP51Q70EK9 711 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 C1QL2Q7Z5L3 287 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 PEG10Q86TG7 708 aaKnown RBP16.26■□□□□ 0.19
CBWD3-204ENST00000377349 MCUR1Q96AQ8 359 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 IER3IP1Q9Y5U9 82 aa16.26■□□□□ 0.19
CBWD3-204ENST00000377349 A0A1W2PRQ8 180 aa16.25■□□□□ 0.19
CBWD3-204ENST00000377349 CTLA4P16410 223 aa16.25■□□□□ 0.19
CBWD3-204ENST00000377349 SCGB2A2Q13296 93 aa16.25■□□□□ 0.19
CBWD3-204ENST00000377349 DGCR6Q14129 220 aa16.25■□□□□ 0.19
CBWD3-204ENST00000377349 FANK1Q8TC84 345 aa16.25■□□□□ 0.19
CBWD3-204ENST00000377349 KLF14Q8TD94 323 aaPredicted RBP16.25■□□□□ 0.19
CBWD3-204ENST00000377349 C4orf45Q96LM5 186 aa16.25■□□□□ 0.19
CBWD3-204ENST00000377349 ESM1Q9NQ30 184 aa16.25■□□□□ 0.19
CBWD3-204ENST00000377349 MAGEL2Q9UJ55 1249 aa16.25■□□□□ 0.19
CBWD3-204ENST00000377349 IMPA2O14732 288 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 SPRY1O43609 319 aaPredicted RBP16.24■□□□□ 0.19
CBWD3-204ENST00000377349 TIMM8AO60220 97 aaPredicted RBP16.24■□□□□ 0.19
CBWD3-204ENST00000377349 GADD45GO95257 159 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 PPP1R3DO95685 299 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 NGFP01138 241 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 FSHBP01225 129 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 ANPEPP15144 967 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 ADRA2CP18825 462 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 SDHAP31040 664 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 MMP15P51511 669 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 SCRN3Q0VDG4 424 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 ARL9Q6T311 187 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 MARS2Q96GW9 593 aaKnown RBP16.24■□□□□ 0.19
CBWD3-204ENST00000377349 NSMCE2Q96MF7 247 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 CDRT15Q96T59 188 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 ELOVL3Q9HB03 270 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 ARL8BQ9NVJ2 186 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 PLEK2Q9NYT0 353 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 TAGLN3Q9UI15 199 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 NDRG4Q9ULP0 352 aaKnown RBP16.24■□□□□ 0.19
CBWD3-204ENST00000377349 SIGLEC7Q9Y286 467 aa16.24■□□□□ 0.19
CBWD3-204ENST00000377349 COA3Q9Y2R0 106 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms