RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 MS4A7Q9GZW8 240 aaPredicted RBP11.61□□□□□ -0.55
USP11-204ENST00000377107 EVA1AQ9H8M9 152 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 COMMD9Q9P000 198 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 KCNN3Q9UGI6 736 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 OR52A1Q9UKL2 312 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 STARP49675 285 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 MRPS10P82664 201 aaKnown RBP11.61□□□□□ -0.55
USP11-204ENST00000377107 SGCBQ16585 318 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 TMUB2Q71RG4 321 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 ARHGEF39Q8N4T4 335 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 ZSCAN1Q8NBB4 408 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 RNF166Q96A37 237 aaPredicted RBP11.61□□□□□ -0.55
USP11-204ENST00000377107 GPX7Q96SL4 187 aaPredicted RBP11.61□□□□□ -0.55
USP11-204ENST00000377107 TXNIPQ9H3M7 391 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 ZCCHC4Q9H5U6 513 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 IFT46Q9NQC8 304 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 PFDN2Q9UHV9 154 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 SESN1Q9Y6P5 492 aa11.61□□□□□ -0.55
USP11-204ENST00000377107 TRBV11-1A0A0K0K1C0 115 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 C5orf51A6NDU8 294 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 SYT7O43581 403 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 HLA-AP01891 365 aaKnown RBP11.6□□□□□ -0.55
USP11-204ENST00000377107 HSD11B1P28845 292 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 S100A11P31949 105 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 ZNF626Q68DY1 528 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 C3orf33Q6P1S2 294 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 FOXRED2Q8IWF2 684 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 ASB5Q8WWX0 329 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 SELENOIQ9C0D9 397 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 PIPOXQ9P0Z9 390 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 IGKV1D-43A0A0B4J1Z2 117 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 TRBV5-5A0A0J9YX44 114 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 MCRIP1C9JLW8 97 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 ZNF217O75362 1048 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 IGF2P01344 180 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 ACHEP22303 614 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 SMUG1Q53HV7 270 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 BIVMQ86UB2 503 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 EXD3Q8N9H8 876 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 STEAP2Q8NFT2 490 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 OR1J2Q8NGS2 313 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 STK35Q8TDR2 534 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 C15orf40Q8WUR7 153 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 RBPMSQ93062 196 aaKnown RBP11.6□□□□□ -0.55
USP11-204ENST00000377107 HGDQ93099 445 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 OR5B2Q96R09 309 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 ZNF471Q9BX82 626 aaPredicted RBP11.6□□□□□ -0.55
USP11-204ENST00000377107 POTEKPQ9BYX7 375 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 NCOR1O75376 2440 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 IGHV1OR21-1A0A087WYE8 117 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 METTL12A8MUP2 240 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 LMO7DNF2Z398 122 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 SLC17A2O00624 439 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 APOC3P02656 99 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 DCNP07585 359 aaKnown RBP11.6□□□□□ -0.55
USP11-204ENST00000377107 RAG2P55895 527 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 PMPCAQ10713 525 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 RNASE10Q5GAN6 216 aaKnown RBP11.6□□□□□ -0.55
USP11-204ENST00000377107 EMC4Q5J8M3 183 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 FNDC7Q5VTL7 733 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 GRINAQ7Z429 371 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 ZNF546Q86UE3 836 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 C12orf45Q8N5I9 185 aaPredicted RBP11.6□□□□□ -0.55
USP11-204ENST00000377107 OR1N1Q8NGS0 311 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 OR52N5Q8NH56 324 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 HOXB13Q92826 284 aaPredicted RBP11.6□□□□□ -0.55
USP11-204ENST00000377107 ADAM19Q9H013 955 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 TAS2R8Q9NYW2 309 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 VSX1Q9NZR4 365 aaPredicted RBP11.6□□□□□ -0.55
USP11-204ENST00000377107 PPP4R1LQ9P1A2 415 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 FRYLO94915 3013 aa11.6□□□□□ -0.55
USP11-204ENST00000377107 THADAQ6YHU6 1953 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 ALG1L2C9J202 215 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 PHYHO14832 338 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 ZNF354AO60765 605 aaPredicted RBP11.59□□□□□ -0.55
USP11-204ENST00000377107 GIPP09681 153 aaPredicted RBP11.59□□□□□ -0.55
USP11-204ENST00000377107 ACSM4P0C7M7 580 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 PI3P19957 117 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 CRABP1P29762 137 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 SLC6A9P48067 706 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 C19orf57Q0VDD7 668 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 CLPPQ16740 277 aaPredicted RBP11.59□□□□□ -0.55
USP11-204ENST00000377107 FAM71CQ8NEG0 241 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 TMEM234Q8WY98 164 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 OR6C1Q96RD1 312 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 BANF2Q9H503 90 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 MMACHCQ9Y4U1 282 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 PLPP3O14495 311 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 HCKP08631 526 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 RNF4P78317 190 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 DEFA5Q01523 94 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 FOXF1Q12946 379 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 HLXQ14774 488 aaPredicted RBP11.59□□□□□ -0.55
USP11-204ENST00000377107 RSPO4Q2I0M5 234 aaPredicted RBP11.59□□□□□ -0.55
USP11-204ENST00000377107 AWAT2Q6E213 333 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 RNF128Q8TEB7 428 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 PTGES2Q9H7Z7 377 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 APMAPQ9HDC9 416 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 SDHAF2Q9NX18 166 aa11.59□□□□□ -0.55
USP11-204ENST00000377107 PTTG3PQ9NZH4 202 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms