RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 UPB1Q9UBR1 384 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 MSRAQ9UJ68 235 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 EMC9Q9Y3B6 208 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 EIF4E2O60573 245 aaKnown RBP11.87□□□□□ -0.51
ACTN1-202ENST00000376839 CD2P06729 351 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 HLA-DOBP13765 273 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 ZMYND11Q15326 602 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 TOMM20Q15388 145 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 NKPD1Q17RQ9 610 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 LRRC37A5PQ49AS3 106 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 PRAMEF17Q5VTA0 474 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 CORO6Q6QEF8 472 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 TTLL10Q6ZVT0 673 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 ADGRE4PQ86SQ3 457 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 C9orf40Q8IXQ3 194 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 TXNIPQ9H3M7 391 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 LDAHQ9H6V9 325 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 GPR27Q9NS67 375 aa11.87□□□□□ -0.51
ACTN1-202ENST00000376839 VSX1Q9NZR4 365 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-202ENST00000376839 COA3Q9Y2R0 106 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-202ENST00000376839 PRUNE2Q8WUY3 3088 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 WIPF3A6NGB9 483 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 OR5H14A6NHG9 310 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 TMEM150CB9EJG8 249 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 H0YIG0 161 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 SULT1C2O00338 296 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 LDLRAD4O15165 306 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 CYB5AP00167 134 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 IL11P20809 199 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 KCTD18Q6PI47 426 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-202ENST00000376839 BPIFB2Q8N4F0 458 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 EIF4E3Q8N5X7 224 aaKnown RBP11.86□□□□□ -0.51
ACTN1-202ENST00000376839 ACBD4Q8NC06 268 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 PXT1Q8NFP0 134 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 OR52N5Q8NH56 324 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 OIT3Q8WWZ8 545 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 SLC25A21Q9BQT8 299 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-202ENST00000376839 NKX2-4Q9H2Z4 354 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 CD207Q9UJ71 328 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 CEP290O15078 2479 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 CPAMD8Q8IZJ3 1885 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 LOC100509620A0A075B734 347 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 TMED7-TICAM2A0A0A6YYA0 188 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 A0A1B0GTI1 187 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 LOC107986453A0A1B0GWG9 222 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 ZNF736B4DX44 427 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-202ENST00000376839 APOC3P02656 99 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 GP1BBP13224 206 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 MGMTP16455 207 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 FSTP19883 344 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 EBPQ15125 230 aaKnown RBP11.86□□□□□ -0.51
ACTN1-202ENST00000376839 BEX5Q5H9J7 111 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 WDFY1Q8IWB7 410 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 OR4D6Q8NGJ1 314 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 OR5M8Q8NGP6 311 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 OR13C3Q8NGS6 347 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 NKD1Q969G9 470 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 FBXW5Q969U6 566 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 SEC22AQ96IW7 307 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 ZNF587Q96SQ5 575 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-202ENST00000376839 SLC38A3Q99624 504 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 TBL1XR1Q9BZK7 514 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 TMEM185BQ9H7F4 350 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 VSIG4Q9Y279 399 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 TMED7Q9Y3B3 224 aa11.86□□□□□ -0.51
ACTN1-202ENST00000376839 NPIPB7O75200 414 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 SRSF10O75494 262 aaKnown RBP11.85□□□□□ -0.51
ACTN1-202ENST00000376839 DXOO77932 396 aaKnown RBP11.85□□□□□ -0.51
ACTN1-202ENST00000376839 CD8AP01732 235 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 DNASE1L1P49184 302 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 ATXN7L3Q14CW9 347 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-202ENST00000376839 C1orf140Q5VVS0 124 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 LIN54Q6MZP7 749 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 CD163Q86VB7 1156 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 PRSS58Q8IYP2 241 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 OR10K1Q8NGX5 313 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 CMBLQ96DG6 245 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 ZNF75AQ96N20 296 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 EDEM2Q9BV94 578 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 SCPEP1Q9HB40 452 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 RASL12Q9NYN1 266 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 DHCR7Q9UBM7 475 aaKnown RBP11.85□□□□□ -0.51
ACTN1-202ENST00000376839 MRTO4Q9UKD2 239 aaKnown RBP11.85□□□□□ -0.51
ACTN1-202ENST00000376839 MMP17Q9ULZ9 603 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 NOP16Q9Y3C1 178 aaKnown RBP11.85□□□□□ -0.51
ACTN1-202ENST00000376839 BRWD1Q9NSI6 2320 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 IGKV3D-11A0A0A0MRZ8 115 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 ALG1L2C9J202 215 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 TOR1AO14656 332 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 TSPAN2O60636 221 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 MT-ATP6P00846 226 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 HLA-AP01891 365 aaKnown RBP11.85□□□□□ -0.51
ACTN1-202ENST00000376839 CD74P04233 296 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 UBBP0CG47 229 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 UBCP0CG48 685 aaKnown RBP11.85□□□□□ -0.51
ACTN1-202ENST00000376839 CD34P28906 385 aa11.85□□□□□ -0.51
ACTN1-202ENST00000376839 LUMP51884 338 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-202ENST00000376839 RPS27AP62979 156 aaKnown RBP11.85□□□□□ -0.51
ACTN1-202ENST00000376839 UBA52P62987 128 aaKnown RBP11.85□□□□□ -0.51
ACTN1-202ENST00000376839 FMODQ06828 376 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms