RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 MAGI1Q96QZ7 1491 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-202ENST00000375427 TRAV8-4A0A0B4J246 113 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 A0A1B0GTW7 788 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 LOC285095A0A1B0GVY8 99 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 B4GALT5O43286 388 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 ATP5LO75964 103 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 ALPLP05186 524 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 CHRM2P08172 466 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 THBS4P35443 961 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 CLDN18P56856 261 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 SF3B4Q15427 424 aaKnown RBP eCLIP5.5□□□□□ -1.53
SCN2A-202ENST00000375427 ASTLQ6HA08 431 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-202ENST00000375427 PRICKLE2Q7Z3G6 844 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 DTX3Q8N9I9 347 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 OR10AD1Q8NGE0 317 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 NUBPLQ8TB37 319 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 SLC39A7Q92504 469 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 KCTD12Q96CX2 325 aaKnown RBP5.5□□□□□ -1.53
SCN2A-202ENST00000375427 SPANXB1Q9NS25 103 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-202ENST00000375427 STARD10Q9Y365 291 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 OR1A2Q9Y585 309 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 DUSP10Q9Y6W6 482 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 COX7A2P2O60397 106 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 NTSR1P30989 418 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 OPRL1P41146 370 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 FLT3LGP49771 235 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 SGSHP51688 502 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 PPP1CAP62136 330 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 RIGQ13278 110 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 KCNC3Q14003 757 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 MICAQ29983 383 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 SPATA45Q537H7 98 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 ZDHHC15Q96MV8 337 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 SYT11Q9BT88 431 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 MS4A6AQ9H2W1 248 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 C6orf106Q9H6K1 298 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-202ENST00000375427 PNPOQ9NVS9 261 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 BEX4Q9NWD9 120 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-202ENST00000375427 STYXL1Q9Y6J8 313 aa5.5□□□□□ -1.53
SCN2A-202ENST00000375427 CPDO75976 1380 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 TRAV39A0A0B4J263 110 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 PQLC2LA1A4F0 135 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 TNFRSF10CO14798 259 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 PHF1O43189 567 aaPredicted RBP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 OAS1P00973 400 aaKnown RBP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 TEAD1P28347 426 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 PRLHRP49683 370 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 PJVKQ0ZLH3 352 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 CEACAM21Q3KPI0 293 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 DLK2Q6UY11 383 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 SIRT2Q8IXJ6 389 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 SGMS2Q8NHU3 365 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 SERINC2Q96SA4 455 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 TTTY10Q9BZA0 68 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 RNF19AQ9NV58 838 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 PRODH2Q9UF12 536 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 V9GYY9 64 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 ATP6V0CP27449 155 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 NKX2-1P43699 371 aaPredicted RBP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 CLCN3P51790 818 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 NKAIN1Q4KMZ8 207 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 C5orf47Q569G3 176 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 PPM1JQ5JR12 505 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 PODNL1Q6PEZ8 512 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 ZDHHC24Q6UX98 284 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 CMC1Q7Z7K0 106 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 OSTM1Q86WC4 334 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 CPA6Q8N4T0 437 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 SECTM1Q8WVN6 248 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 NEUROG1Q92886 237 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 ARHGEF12Q9NZN5 1544 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 CYB561D2O14569 222 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 TRUB2O95900 331 aaKnown RBP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 TFAP2AP05549 437 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 MGPP08493 103 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 ST6GAL1P15907 406 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 YBX3P16989 372 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 BRS3P32247 399 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 ZNF133P52736 654 aaPredicted RBP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 PRSS12P56730 875 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 MFAP5Q13361 173 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 TMEM241Q24JQ0 296 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 C9orf153Q5TBE3 101 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 DOK3Q7L591 496 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 MKXQ8IYA7 352 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 ZNF480Q8WV37 535 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 CDC42EP3Q9UKI2 254 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 MRPS28Q9Y2Q9 187 aaKnown RBP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 RBMY1BA6NDE4 496 aaKnown RBP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 RBMY1EA6NEQ0 496 aaKnown RBP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 MCRIP1C9JLW8 97 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 MS4A18H0YCH9 400 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 NPHS1O60500 1241 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 SHBGP04278 402 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 RBMY1DP0C7P1 496 aaKnown RBP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 RBMY1A1P0DJD3 496 aaKnown RBP5.49□□□□□ -1.53
SCN2A-202ENST00000375427 RBMY1CP0DJD4 496 aa5.49□□□□□ -1.53
SCN2A-202ENST00000375427 ZNF8P17098 575 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms