RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 REEP5Q00765 189 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 OR8G1Q15617 311 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 RAB11BQ15907 218 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 FAHD2BQ6P2I3 314 aaPredicted RBP11.66□□□□□ -0.54
PRPF4-201ENST00000374198 Q6ZRG5 221 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 ZDHHC22Q8N966 263 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF511Q8NB15 262 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 ACBD4Q8NC06 268 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 LYPD6BQ8NI32 183 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 C2orf15Q8WU43 125 aaKnown RBP11.66□□□□□ -0.54
PRPF4-201ENST00000374198 MRGPRFQ96AM1 343 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 FAHD2AQ96GK7 314 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 NRTNQ99748 197 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 SMOC1Q9H4F8 434 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 SLC2A8Q9NY64 477 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 PIAS3Q9Y6X2 628 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 MDC1Q14676 2089 aaKnown RBP11.66□□□□□ -0.54
PRPF4-201ENST00000374198 EPOPA6NHQ4 379 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 DUXAA6NLW8 204 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 MKRN2OSH3BPM6 223 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 RPL36A-HNRNPH2H7BZ11 118 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 GLCEO94923 617 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 OR2C1O95371 312 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 ERCC1P07992 297 aaPredicted RBP11.66□□□□□ -0.54
PRPF4-201ENST00000374198 TACSTD2P09758 323 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 LAMP2P13473 410 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 DUSP8Q13202 625 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 MEF2DQ14814 521 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 SLC9A5Q14940 896 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 TOMM20Q15388 145 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 RPL7L1Q6DKI1 246 aaKnown RBP11.66□□□□□ -0.54
PRPF4-201ENST00000374198 PRSS54Q6PEW0 395 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 RBM18Q96H35 190 aaKnown RBP11.66□□□□□ -0.54
PRPF4-201ENST00000374198 INSM2Q96T92 566 aaPredicted RBP11.66□□□□□ -0.54
PRPF4-201ENST00000374198 TWSG1Q9GZX9 223 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 HDGFL3Q9Y3E1 203 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 PCYT1BQ9Y5K3 369 aaPredicted RBP11.66□□□□□ -0.54
PRPF4-201ENST00000374198 IER3IP1Q9Y5U9 82 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 MTCL1Q9Y4B5 1905 aaKnown RBP11.65□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF726A6NNF4 738 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 LYL1P12980 280 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 C5AR1P21730 350 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 PCP4P48539 62 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 RPS23P62266 143 aaKnown RBP11.65□□□□□ -0.54
PRPF4-201ENST00000374198 RAP1AP62834 184 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 GDPD4Q6W3E5 623 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 SPNS3Q6ZMD2 512 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.65□□□□□ -0.54
PRPF4-201ENST00000374198 MAMDC2Q7Z304 686 aaPredicted RBP11.65□□□□□ -0.54
PRPF4-201ENST00000374198 FAM220AQ7Z4H9 259 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 ADAD2Q8NCV1 583 aaKnown RBP11.65□□□□□ -0.54
PRPF4-201ENST00000374198 OR10AC1Q8NH08 325 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 MAFAQ8NHW3 353 aaPredicted RBP11.65□□□□□ -0.54
PRPF4-201ENST00000374198 ST7LQ8TDW4 575 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 MR1Q95460 341 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 UBQLN4Q9NRR5 601 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 OR5AC2Q9NZP5 309 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 UMAD1C9J7I0 102 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 C1QTNF3-AMACRE9PGA6 284 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 EFSO43281 561 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 THBS1P07996 1170 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 FBXO45P0C2W1 286 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 AKR1C4P17516 323 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 MPZP25189 248 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 NHLH2Q02577 135 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 DUSP5Q16690 384 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 KHDC3LQ587J8 217 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 SLC35D3Q5M8T2 416 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 MRPL2Q5T653 305 aaKnown RBP11.65□□□□□ -0.54
PRPF4-201ENST00000374198 OR4S1Q8NGB4 309 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 GALNT14Q96FL9 552 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 NMNAT3Q96T66 252 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 GPR61Q9BZJ8 451 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 AICDAQ9GZX7 198 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 FAM86C1Q9NVL1 165 aa11.65□□□□□ -0.54
PRPF4-201ENST00000374198 A0A1B0GTH9 108 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 H3BSH0 61 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 SLC17A2O00624 439 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 HOXA2O43364 376 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 DNAJB6O75190 326 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF432O94892 652 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 RAB6AP20340 208 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF84P51523 738 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 SRSF5Q13243 272 aaKnown RBP11.64□□□□□ -0.55
PRPF4-201ENST00000374198 EIF2B1Q14232 305 aaKnown RBP11.64□□□□□ -0.55
PRPF4-201ENST00000374198 TTLL10Q6ZVT0 673 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 TRAPPC5Q8IUR0 188 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF595Q8IYB9 648 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 CRIPAKQ8N1N5 446 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 HIST3H2BBQ8N257 126 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 ZNF610Q8N9Z0 462 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 AVL9Q8NBF6 648 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 BHLHE23Q8NDY6 225 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 OR51A4Q8NGJ6 313 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 ROBO4Q8WZ75 1007 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 LMF1Q96S06 567 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 METTL9Q9H1A3 318 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 PTGES2Q9H7Z7 377 aa11.64□□□□□ -0.55
PRPF4-201ENST00000374198 BCO1Q9HAY6 547 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms