RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 NRROSQ86YC3 692 aa16.54■□□□□ 0.24
MMP9-201ENST00000372330 FRMD1Q8N878 549 aa16.54■□□□□ 0.24
MMP9-201ENST00000372330 OR5K2Q8NHB8 316 aa16.54■□□□□ 0.24
MMP9-201ENST00000372330 RRNAD1Q96FB5 475 aaKnown RBP16.54■□□□□ 0.24
MMP9-201ENST00000372330 MISP3Q96FF7 219 aa16.54■□□□□ 0.24
MMP9-201ENST00000372330 SLC35A4Q96G79 324 aa16.54■□□□□ 0.24
MMP9-201ENST00000372330 TNFRSF13CQ96RJ3 184 aa16.54■□□□□ 0.24
MMP9-201ENST00000372330 CST11Q9H112 138 aa16.54■□□□□ 0.24
MMP9-201ENST00000372330 PISDQ9UG56 409 aa16.54■□□□□ 0.24
MMP9-201ENST00000372330 VSIG4Q9Y279 399 aa16.54■□□□□ 0.24
MMP9-201ENST00000372330 STARD10Q9Y365 291 aa16.54■□□□□ 0.24
MMP9-201ENST00000372330 TRBV5-7A0A0A0MS05 114 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 COX5BP10606 129 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 LAMP2P13473 410 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 ADAM8P78325 824 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 C2orf76Q3KRA6 126 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 DPPA2Q7Z7J5 298 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 AMER3Q8N944 861 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 OR5T3Q8NGG3 340 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 OR51L1Q8NGJ5 315 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 OR10D4PQ8NGN7 298 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 OR4K13Q8NH42 304 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 OR6X1Q8NH79 312 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 RNF166Q96A37 237 aaPredicted RBP16.53■□□□□ 0.24
MMP9-201ENST00000372330 FAM3DQ96BQ1 224 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 CHRNA9Q9UGM1 479 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 KCNIP3Q9Y2W7 256 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 MUC22E2RYF6 1773 aaPredicted RBP16.53■□□□□ 0.24
MMP9-201ENST00000372330 TBC1D3BA6NDS4 549 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 AGPAT2O15120 278 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 LRP3O75074 770 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 NUBP1P53384 320 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 SNRPNP63162 240 aaKnown RBP16.53■□□□□ 0.24
MMP9-201ENST00000372330 REEP5Q00765 189 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 TBC1D3GQ6DHY5 549 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 CDPF1Q6NVV7 123 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 ADAMTSL4Q6UY14 1074 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 C19orf47Q8N9M1 422 aaKnown RBP16.53■□□□□ 0.24
MMP9-201ENST00000372330 RSC1A1Q92681 617 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 CDS1Q92903 461 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 DOK5Q9P104 306 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 MSRAQ9UJ68 235 aa16.53■□□□□ 0.24
MMP9-201ENST00000372330 ELOA3CA0A087WX78 387 aaPredicted RBP16.52■□□□□ 0.24
MMP9-201ENST00000372330 GLOD5A6NK44 160 aa16.52■□□□□ 0.24
MMP9-201ENST00000372330 C1QTNF3-AMACRE9PGA6 284 aa16.52■□□□□ 0.24
MMP9-201ENST00000372330 MKRN2OSH3BPM6 223 aa16.52■□□□□ 0.24
MMP9-201ENST00000372330 HIST1H1CP16403 213 aaKnown RBP16.52■□□□□ 0.24
MMP9-201ENST00000372330 PTGER1P34995 402 aa16.52■□□□□ 0.24
MMP9-201ENST00000372330 HSD11B2P80365 405 aa16.52■□□□□ 0.24
MMP9-201ENST00000372330 PRSS54Q6PEW0 395 aa16.52■□□□□ 0.24
MMP9-201ENST00000372330 TGIF2LXQ8IUE1 241 aa16.52■□□□□ 0.24
MMP9-201ENST00000372330 SLC6A7Q99884 636 aa16.52■□□□□ 0.24
MMP9-201ENST00000372330 MRPL37Q9BZE1 423 aaKnown RBP16.52■□□□□ 0.24
MMP9-201ENST00000372330 TGIF2Q9GZN2 237 aa16.52■□□□□ 0.24
MMP9-201ENST00000372330 TAF9BQ9HBM6 251 aa16.52■□□□□ 0.24
MMP9-201ENST00000372330 DNAJB11Q9UBS4 358 aa16.52■□□□□ 0.24
MMP9-201ENST00000372330 FARSAQ9Y285 508 aaKnown RBP16.52■□□□□ 0.24
MMP9-201ENST00000372330 MDC1Q14676 2089 aaKnown RBP16.52■□□□□ 0.24
MMP9-201ENST00000372330 RANBP2P49792 3224 aaKnown RBP16.52■□□□□ 0.23
MMP9-201ENST00000372330 TRAV8-7A0A075B6U6 113 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 ALOX12BO75342 701 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 SERPINA5P05154 406 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 POU2F2P09086 479 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 MC3RP41968 323 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 ARRB1P49407 418 aaPredicted RBP16.52■□□□□ 0.23
MMP9-201ENST00000372330 NDUFA6P56556 154 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 GAMTQ14353 236 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 RAB11BQ15907 218 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 HIST2H3PS2Q5TEC6 136 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 METRNLQ641Q3 311 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 PAPD4Q6PIY7 484 aaKnown RBP16.52■□□□□ 0.23
MMP9-201ENST00000372330 KCTD9Q7L273 389 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 ZNF595Q8IYB9 648 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 C7orf61Q8IZ16 206 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 C12orf76Q8N812 135 aaPredicted RBP16.52■□□□□ 0.23
MMP9-201ENST00000372330 ACBD4Q8NC06 268 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 SOX7Q9BT81 388 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 MENTQ9BUN1 341 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 HDAC8Q9BY41 377 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 PCBD2Q9H0N5 130 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 OR2S2Q9NQN1 319 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 UBQLN4Q9NRR5 601 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 TM7SF3Q9NS93 570 aa16.52■□□□□ 0.23
MMP9-201ENST00000372330 A0A0A6YYH2 397 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 C13orf42A0A1B0GVH6 325 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 A6NJ64 397 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 H7C1Q1 480 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 CLEC3AO75596 197 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 SERPINF1P36955 418 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 PBX2P40425 430 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 CASP6P55212 293 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 CDK3Q00526 305 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 SURF2Q15527 256 aaPredicted RBP16.51■□□□□ 0.23
MMP9-201ENST00000372330 ARHGAP11BQ3KRB8 267 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 TMEM35AQ53FP2 167 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 FAM78AQ5JUQ0 283 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 BIVMQ86UB2 503 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 CD163Q86VB7 1156 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 SUSD6Q92537 303 aa16.51■□□□□ 0.23
MMP9-201ENST00000372330 COL4A3Q01955 1670 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms