RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 DVL3Q92997 716 aaPredicted RBP11.1□□□□□ -0.63
RPF1-201ENST00000370654 RASD2Q96D21 266 aa11.1□□□□□ -0.63
RPF1-201ENST00000370654 CMBLQ96DG6 245 aa11.1□□□□□ -0.63
RPF1-201ENST00000370654 TIMD4Q96H15 378 aa11.1□□□□□ -0.63
RPF1-201ENST00000370654 HSH2DQ96JZ2 352 aa11.1□□□□□ -0.63
RPF1-201ENST00000370654 SIGLEC11Q96RL6 698 aa11.1□□□□□ -0.63
RPF1-201ENST00000370654 EGFL7Q9UHF1 273 aa11.1□□□□□ -0.63
RPF1-201ENST00000370654 IL20RAQ9UHF4 553 aa11.1□□□□□ -0.63
RPF1-201ENST00000370654 PURGQ9UJV8 347 aaKnown RBP11.1□□□□□ -0.63
RPF1-201ENST00000370654 CAPN7Q9Y6W3 813 aa11.1□□□□□ -0.63
RPF1-201ENST00000370654 TEX13CA0A0J9YWL9 993 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 A6NIZ1 184 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 TIMM8AO60220 97 aaPredicted RBP11.09□□□□□ -0.63
RPF1-201ENST00000370654 DOK2O60496 412 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 PTP4A3O75365 173 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 ABHD16AO95870 558 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 SERPINA1P01009 418 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 IFNW1P05000 195 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 CD14P08571 375 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 VIMP08670 466 aaKnown RBP11.09□□□□□ -0.63
RPF1-201ENST00000370654 DBHP09172 617 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 HTR5AP47898 357 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 SLC7A2P52569 658 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 RAP1BP61224 184 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 RAP1AP62834 184 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 MAPRE2Q15555 327 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 IFI44LQ53G44 452 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 CCDC92Q53HC0 331 aaPredicted RBP11.09□□□□□ -0.63
RPF1-201ENST00000370654 C1orf94Q6P1W5 598 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 C8orf82Q6P1X6 216 aaPredicted RBP11.09□□□□□ -0.63
RPF1-201ENST00000370654 ZNF730Q6ZMV8 503 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 TMPRSS11FQ6ZWK6 438 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 TREML1Q86YW5 311 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 BCL6BQ8N143 479 aaPredicted RBP11.09□□□□□ -0.63
RPF1-201ENST00000370654 DEFB108BQ8NET1 73 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 OR2Z1Q8NG97 314 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 FAM46AQ96IP4 442 aaKnown RBP11.09□□□□□ -0.63
RPF1-201ENST00000370654 TMEM106BQ9NUM4 274 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 ZNF446Q9NWS9 450 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 NPTNQ9Y639 398 aa11.09□□□□□ -0.63
RPF1-201ENST00000370654 SOX21Q9Y651 276 aaPredicted RBP11.09□□□□□ -0.63
RPF1-201ENST00000370654 PRSS37A4D1T9 235 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 GMNCA6NCL1 334 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 C12orf71A8MTZ7 269 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 J3QLI3 93 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 COX4I1P13073 169 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 RPL4P36578 427 aaKnown RBP11.08□□□□□ -0.64
RPF1-201ENST00000370654 LIMS1P48059 325 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 GSK3BP49841 420 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 PCBD1P61457 104 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 HLXQ14774 488 aaPredicted RBP11.08□□□□□ -0.64
RPF1-201ENST00000370654 ZMYND11Q15326 602 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 SEC23BQ15437 767 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 TUSC1Q2TAM9 212 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 ZBED5Q49AG3 693 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 KLF17Q5JT82 389 aaPredicted RBP11.08□□□□□ -0.64
RPF1-201ENST00000370654 FAM205BPQ63HN1 556 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 PTCHD4Q6ZW05 846 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 SYT9Q86SS6 491 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 ZNF283Q8N7M2 679 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 FAM86B1Q8N7N1 296 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 NANPQ8TBE9 248 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 SLC7A13Q8TCU3 470 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 ITLN1Q8WWA0 313 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 LZICQ8WZA0 190 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 TAF15Q92804 592 aaKnown RBP eCLIP11.08□□□□□ -0.64
RPF1-201ENST00000370654 GCDHQ92947 438 aaPredicted RBP11.08□□□□□ -0.64
RPF1-201ENST00000370654 GPA33Q99795 319 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 EGLN1Q9GZT9 426 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 SYT4Q9H2B2 425 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 NMNAT1Q9HAN9 279 aaPredicted RBP11.08□□□□□ -0.64
RPF1-201ENST00000370654 ELOVL3Q9HB03 270 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 CYSLTR2Q9NS75 346 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 TBCCD1Q9NVR7 557 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 GRHPRQ9UBQ7 328 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 ZDHHC8Q9ULC8 765 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 COA3Q9Y2R0 106 aaPredicted RBP11.08□□□□□ -0.64
RPF1-201ENST00000370654 PPIAL4AQ9Y536 164 aa11.08□□□□□ -0.64
RPF1-201ENST00000370654 IGHV3-64DA0A0J9YX35 117 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 HTR3EA5X5Y0 456 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 H0YL77 283 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 H3BSA7 217 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 TRIM77I1YAP6 450 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 DCTN6O00399 190 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 RER1O15258 196 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 SGCEO43556 437 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 SLC16A7O60669 478 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 DIRAS1O95057 198 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 ZNF205O95201 554 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 COX5BP10606 129 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 NR2C1P13056 603 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 KITLGP21583 273 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 LIPAP38571 399 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 ARHGDIAP52565 204 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 PRSS12P56730 875 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 MEP1BQ16820 701 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 FKBP9P1Q75LS8 142 aa11.07□□□□□ -0.64
RPF1-201ENST00000370654 RNF113BQ8IZP6 322 aaKnown RBP11.07□□□□□ -0.64
RPF1-201ENST00000370654 OR5AS1Q8N127 324 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms