RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 LIMS3P0CW19 117 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 LIMS4P0CW20 117 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 NTSP30990 170 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 LCN1P31025 176 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 KIR2DL2P43627 348 aaPredicted RBP13.25□□□□□ -0.29
LMO4-201ENST00000370542 TGM4P49221 684 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 SUCLG1P53597 346 aaKnown RBP13.25□□□□□ -0.29
LMO4-201ENST00000370542 RPS7P62081 194 aaKnown RBP13.25□□□□□ -0.29
LMO4-201ENST00000370542 ADAM8P78325 824 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 PRR5P85299 388 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 ZNF155Q12901 538 aaPredicted RBP13.25□□□□□ -0.29
LMO4-201ENST00000370542 MLC1Q15049 377 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 EXOSC6Q5RKV6 272 aaKnown RBP13.25□□□□□ -0.29
LMO4-201ENST00000370542 PXDC1Q5TGL8 231 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 OR2A2Q6IF42 318 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 PAQR6Q6TCH4 344 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 APOOLQ6UXV4 268 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 GID4Q8IVV7 300 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 GCNT2Q8N0V5 402 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 FAM71CQ8NEG0 241 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 GATAD2BQ8WXI9 593 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 TMPRSS13Q9BYE2 586 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 RNF122Q9H9V4 155 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 Q9N2J8 555 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 KRCC1Q9NPI7 259 aaPredicted RBP13.25□□□□□ -0.29
LMO4-201ENST00000370542 ABRACLQ9P1F3 81 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 P2RX2Q9UBL9 471 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 MRTO4Q9UKD2 239 aaKnown RBP13.25□□□□□ -0.29
LMO4-201ENST00000370542 ZNF337Q9Y3M9 751 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 ZNF175Q9Y473 711 aa13.25□□□□□ -0.29
LMO4-201ENST00000370542 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 A0A1W2PPL8 197 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 OR2M5A3KFT3 312 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 STX11O75558 287 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 UBL3O95164 117 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 NGFRP08138 427 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 ELK1P19419 428 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 HOXC12P31275 282 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 NUP62P37198 522 aaPredicted RBP13.24□□□□□ -0.29
LMO4-201ENST00000370542 MMP15P51511 669 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 PSMD4P55036 377 aaKnown RBP13.24□□□□□ -0.29
LMO4-201ENST00000370542 CDH11P55287 796 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 AP3S2P59780 193 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 TSPAN31Q12999 210 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 CAMK2DQ13557 499 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 DEFB113Q30KQ7 82 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 BCL2L15Q5TBC7 163 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 DEF8Q6ZN54 512 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 TOMM5Q8N4H5 51 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 OR11H7Q8NGC8 314 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 OR4K5Q8NGD3 323 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 DUSP19Q8WTR2 217 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 ASB13Q8WXK3 278 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 GIMAP5Q96F15 307 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 TMEM19Q96HH6 336 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 DPCDQ9BVM2 203 aaPredicted RBP13.24□□□□□ -0.29
LMO4-201ENST00000370542 PTGES2Q9H7Z7 377 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 BCL2L10Q9HD36 194 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 RDH8Q9NYR8 311 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 MED11Q9P086 117 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 H2AFY2Q9P0M6 372 aaPredicted RBP13.24□□□□□ -0.29
LMO4-201ENST00000370542 RHCGQ9UBD6 479 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 PFDN2Q9UHV9 154 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 RTTNQ86VV8 2226 aa13.24□□□□□ -0.29
LMO4-201ENST00000370542 SLC22A20A6NK97 555 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 ALG1L2C9J202 215 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 SMLR1H3BR10 107 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 EMC8O43402 210 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 NDUFA2O43678 99 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 ECDO95905 644 aaPredicted RBP13.23□□□□□ -0.29
LMO4-201ENST00000370542 IGKV1D-16P01601 117 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 BCHEP06276 602 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 CD8BP10966 210 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 HOXB1P14653 301 aaPredicted RBP13.23□□□□□ -0.29
LMO4-201ENST00000370542 HTR1FP30939 366 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 ZNF81P51508 661 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 PUDPQ08623 228 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 C17orf67Q0P5P2 114 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 FGFBP1Q14512 234 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 ZNHIT3Q15649 155 aaPredicted RBP13.23□□□□□ -0.29
LMO4-201ENST00000370542 METTL11BQ5VVY1 283 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 PODNL1Q6PEZ8 512 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 ZNF474Q6S9Z5 364 aaPredicted RBP13.23□□□□□ -0.29
LMO4-201ENST00000370542 KRTAP1-3Q8IUG1 177 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 MEIOBQ8N635 442 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 GPR32P1Q8NGA4 272 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 C15orf40Q8WUR7 153 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 SLC38A5Q8WUX1 472 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 PIGQQ9BRB3 760 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 IFT27Q9BW83 186 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 ACSS1Q9NUB1 689 aaPredicted RBP13.23□□□□□ -0.29
LMO4-201ENST00000370542 SLCO1C1Q9NYB5 712 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 MALT1Q9UDY8 824 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 NDRG3Q9UGV2 375 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 A4GNTQ9UNA3 340 aa13.23□□□□□ -0.29
LMO4-201ENST00000370542 GXYLT2A0PJZ3 443 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 OR6C65A6NJZ3 312 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 LRRN3E7EW58 273 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 H0YC42 278 aa13.22□□□□□ -0.29
LMO4-201ENST00000370542 GTPBP1O00178 669 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms