RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 RAB1AP62820 205 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 EFNB1P98172 346 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 EIF2B1Q14232 305 aaKnown RBP11.04□□□□□ -0.64
EFNA1-201ENST00000368406 KCNMB1Q16558 191 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 FBXO17Q96EF6 278 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 RNFT2Q96EX2 444 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 LURAP1Q96LR2 239 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 ANKRD60Q9BZ19 345 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 WDR76Q9H967 626 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 MRPL22Q9NWU5 206 aaKnown RBP11.04□□□□□ -0.64
EFNA1-201ENST00000368406 FBXL3Q9UKT7 428 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 SLC25A15Q9Y619 301 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 PDZD2O15018 2839 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 SPG11Q96JI7 2443 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 ALPK2Q86TB3 2170 aa11.04□□□□□ -0.64
EFNA1-201ENST00000368406 HRNRQ86YZ3 2850 aaPredicted RBP11.03□□□□□ -0.64
EFNA1-201ENST00000368406 DOK2O60496 412 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 FAM20BO75063 409 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 APOL3O95236 402 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 CRYGSP22914 178 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 MYF6P23409 242 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 PAX7P23759 505 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 RPS27P42677 84 aaKnown RBP11.03□□□□□ -0.64
EFNA1-201ENST00000368406 ZNF91Q05481 1191 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 TMED1Q13445 227 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 ENDOGQ14249 297 aaKnown RBP11.03□□□□□ -0.64
EFNA1-201ENST00000368406 SLC25A30Q5SVS4 291 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 LINC01590Q5TEZ4 76 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 CORO6Q6QEF8 472 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 C22orf34Q6ZV56 151 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 USP51Q70EK9 711 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 SHFQ7M4L6 423 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 SLC16A9Q7RTY1 509 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 TMEM200AQ86VY9 491 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 ALDH16A1Q8IZ83 802 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 WDR31Q8NA23 367 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 GJC3Q8NFK1 279 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 AKR7LQ8NHP1 331 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 CLEC4MQ9H2X3 399 aaPredicted RBP11.03□□□□□ -0.64
EFNA1-201ENST00000368406 PLEK2Q9NYT0 353 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 LAMP5Q9UJQ1 280 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 RPL36Q9Y3U8 105 aaKnown RBP11.03□□□□□ -0.64
EFNA1-201ENST00000368406 TIMM10BQ9Y5J6 103 aa11.03□□□□□ -0.64
EFNA1-201ENST00000368406 SGCEO43556 437 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 PTHP01270 115 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 THBDP07204 575 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 DBTP11182 482 aaKnown RBP11.02□□□□□ -0.64
EFNA1-201ENST00000368406 GABRB1P18505 474 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 APLNRP35414 380 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 HTR5AP47898 357 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 KRTAP10-9P60411 292 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 ISL1P61371 349 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 GGTLC2Q14390 218 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 RAB39AQ14964 217 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 TAF13Q15543 124 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 SMN1Q16637 294 aaKnown RBP11.02□□□□□ -0.64
EFNA1-201ENST00000368406 PABPC1L2AQ5JQF8 200 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 C1QTNF12Q5T7M4 302 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 DPY19L4Q7Z388 723 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 DCXRQ7Z4W1 244 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 SYT9Q86SS6 491 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 SLC35F2Q8IXU6 374 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 OR10H4Q8NGA5 316 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 FGFBP3Q8TAT2 258 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 THEM6Q8WUY1 208 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 APH1BQ8WW43 257 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 BOD1Q96IK1 185 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 TBX5Q99593 518 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 WACQ9BTA9 647 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 OR2H1Q9GZK4 316 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 ESRP2Q9H6T0 727 aaKnown RBP11.02□□□□□ -0.64
EFNA1-201ENST00000368406 AMBNQ9NP70 447 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 ZNF224Q9NZL3 707 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 GDF2Q9UK05 429 aaPredicted RBP11.02□□□□□ -0.64
EFNA1-201ENST00000368406 LHFPL6Q9Y693 200 aa11.02□□□□□ -0.64
EFNA1-201ENST00000368406 POLQO75417 2590 aa11.02□□□□□ -0.65
EFNA1-201ENST00000368406 CSMD1Q96PZ7 3565 aa11.02□□□□□ -0.65
EFNA1-201ENST00000368406 IRGMA1A4Y4 181 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 ZNF503-AS2A6NEH8 195 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 DEFB108AA8MXU0 73 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 ZNF670-ZNF695F2Z2N8 137 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 WBP4O75554 376 aaKnown RBP11.01□□□□□ -0.65
EFNA1-201ENST00000368406 CBR1P16152 277 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 CCNOP22674 350 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 CDK5R2Q13319 367 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 RAB35Q15286 201 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 SLC18B1Q6NT16 456 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 ZNF774Q6NX45 483 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 TMEM108Q6UXF1 575 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 SPATC1Q76KD6 591 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 TIGD4Q8IY51 512 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 ZNF454Q8N9F8 522 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 BPIFB6Q8NFQ5 453 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 COPS4Q9BT78 406 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 TTTY10Q9BZA0 68 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 YIPF3Q9GZM5 350 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 C1orf198Q9H425 327 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 MARCH7Q9H992 704 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 CDH20Q9HBT6 801 aa11.01□□□□□ -0.65
EFNA1-201ENST00000368406 ADGRL4Q9HBW9 690 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms