RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TIMP4Q99727 224 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 MRPL13Q9BYD1 178 aaKnown RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 SRXN1Q9BYN0 137 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 ZDHHC11Q9H8X9 412 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 NBASA2RRP1 2371 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 SELENOFO60613 162 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 SLC16A7O60669 478 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 RAMP1O60894 148 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 SNAPINO95295 136 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 ACTL6AO96019 429 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 IGHG1P01857 330 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 CTLA4P16410 223 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 ZNF708P17019 499 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 NAA10P41227 235 aaPredicted RBP10.73□□□□□ -0.69
USF1-203ENST00000368021 HAAOP46952 286 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 SUCLG1P53597 346 aaKnown RBP10.73□□□□□ -0.69
USF1-203ENST00000368021 CLDN15P56746 228 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 POLR2GP62487 172 aaKnown RBP eCLIP10.73□□□□□ -0.69
USF1-203ENST00000368021 ZNF85Q03923 595 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 GLO1Q04760 184 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 FAPQ12884 760 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 AQP6Q13520 282 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 TPBGQ13641 420 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 SLC17A1Q14916 467 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 SSX1Q16384 188 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 TSTQ16762 297 aaKnown RBP10.73□□□□□ -0.69
USF1-203ENST00000368021 THEM4Q5T1C6 240 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 ATCAYQ86WG3 371 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 CDH26Q8IXH8 852 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 SYS1Q8N2H4 156 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 ARL6IP6Q8N6S5 226 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 OR10D3Q8NH80 312 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 DACT3Q96B18 629 aaPredicted RBP10.73□□□□□ -0.69
USF1-203ENST00000368021 TBX5Q99593 518 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 SLIRPQ9GZT3 109 aaKnown RBP10.73□□□□□ -0.69
USF1-203ENST00000368021 NDUFB11Q9NX14 153 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 SESN1Q9Y6P5 492 aa10.73□□□□□ -0.69
USF1-203ENST00000368021 SLC35F4A4IF30 521 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 FAM171A2A8MVW0 826 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 SMAD9O15198 467 aaKnown RBP10.72□□□□□ -0.69
USF1-203ENST00000368021 MT-ND5P03915 603 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 PGA4P0DJD7 388 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 PGA3P0DJD8 388 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 NR2C1P13056 603 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 KLK2P20151 261 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 CD79BP40259 229 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 EIF1AXP47813 144 aaKnown RBP10.72□□□□□ -0.69
USF1-203ENST00000368021 HOXA1P49639 335 aaPredicted RBP10.72□□□□□ -0.69
USF1-203ENST00000368021 STARP49675 285 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 CLDN18P56856 261 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 ZNF704Q6ZNC4 412 aaPredicted RBP10.72□□□□□ -0.69
USF1-203ENST00000368021 TRILQ7L0X0 811 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 BTLAQ7Z6A9 289 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 PHC2Q8IXK0 858 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 ZADH2Q8N4Q0 377 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 RBMXL3Q8N7X1 1067 aaKnown RBP10.72□□□□□ -0.69
USF1-203ENST00000368021 ZNF511Q8NB15 262 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 NOXO1Q8NFA2 376 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 OR9K2Q8NGE7 335 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 SPRYD4Q8WW59 207 aaPredicted RBP10.72□□□□□ -0.69
USF1-203ENST00000368021 UFD1Q92890 307 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 RBP7Q96R05 134 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 UCN2Q96RP3 112 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 PPP1R14DQ9NXH3 145 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 BABAM2Q9NXR7 383 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 PRELID3BQ9Y3B1 194 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 TMEM14AQ9Y6G1 99 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 RP1L1Q8IWN7 2480 aaPredicted RBP10.72□□□□□ -0.69
USF1-203ENST00000368021 OR6C65A6NJZ3 312 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 NPIPA2E9PIF3 369 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 NPIPA3F8WFD2 350 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 GATCO43716 136 aaKnown RBP10.72□□□□□ -0.69
USF1-203ENST00000368021 AIREO43918 545 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 CXCL13O43927 109 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 PSMA1P25786 263 aaKnown RBP10.72□□□□□ -0.69
USF1-203ENST00000368021 SOX6P35712 828 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 TAS2R43P59537 309 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 HIST3H3Q16695 136 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 PXDC1Q5TGL8 231 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 ABLIM2Q6H8Q1 611 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 LYPD4Q6UWN0 246 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 GDPGP1Q6ZNW5 385 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 CDC20BQ86Y33 519 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 WDFY1Q8IWB7 410 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 MEIOBQ8N635 442 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 SYT14Q8NB59 555 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 NEIL3Q8TAT5 605 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 SLC7A6Q92536 515 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 HYLS1Q96M11 299 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 INTS14Q96SY0 518 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 EMC6Q9BV81 110 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 WDR76Q9H967 626 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 TRIM36Q9NQ86 728 aa10.72□□□□□ -0.69
USF1-203ENST00000368021 IGHV3-15A0A0B4J1V0 119 aa10.71□□□□□ -0.69
USF1-203ENST00000368021 METTL15A6NJ78 407 aa10.71□□□□□ -0.69
USF1-203ENST00000368021 ZNF726A6NNF4 738 aa10.71□□□□□ -0.69
USF1-203ENST00000368021 PHYHO14832 338 aa10.71□□□□□ -0.69
USF1-203ENST00000368021 TBX1O43435 398 aa10.71□□□□□ -0.69
USF1-203ENST00000368021 KHDRBS3O75525 346 aaKnown RBP10.71□□□□□ -0.69
USF1-203ENST00000368021 APOC1P02654 83 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms