RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 TMED4Q7Z7H5 227 aa16.37■□□□□ 0.21
SPNS3-201ENST00000355530 OR1S1Q8NH92 325 aa16.37■□□□□ 0.21
SPNS3-201ENST00000355530 TINAGL1Q9GZM7 467 aaPredicted RBP16.37■□□□□ 0.21
SPNS3-201ENST00000355530 RAB33BQ9H082 229 aa16.37■□□□□ 0.21
SPNS3-201ENST00000355530 EMC9Q9Y3B6 208 aa16.37■□□□□ 0.21
SPNS3-201ENST00000355530 MRPS18BQ9Y676 258 aaKnown RBP16.37■□□□□ 0.21
SPNS3-201ENST00000355530 SZT2Q5T011 3432 aa16.37■□□□□ 0.21
SPNS3-201ENST00000355530 LOC107986453A0A1B0GWG9 222 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 LOC390937A0A1W2PQ73 354 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 M0QYG6 137 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 NUDT21O43809 227 aaKnown RBP16.36■□□□□ 0.21
SPNS3-201ENST00000355530 OR2T1O43869 369 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 FGL1Q08830 312 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 MELKQ14680 651 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 TUSC1Q2TAM9 212 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 TMEM81Q6P7N7 255 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 MDGA2Q7Z553 956 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 EIF4E3Q8N5X7 224 aaKnown RBP16.36■□□□□ 0.21
SPNS3-201ENST00000355530 BVESQ8NE79 360 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 LHFPL5Q8TAF8 219 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 GPR119Q8TDV5 335 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 EDEM2Q9BV94 578 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 SHARPINQ9H0F6 387 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 TRAV14DV4A0A0A6YYC5 116 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 CD8AP01732 235 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 UBBP0CG47 229 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 UBCP0CG48 685 aaKnown RBP16.36■□□□□ 0.21
SPNS3-201ENST00000355530 RPS27AP62979 156 aaKnown RBP16.36■□□□□ 0.21
SPNS3-201ENST00000355530 UBA52P62987 128 aaKnown RBP16.36■□□□□ 0.21
SPNS3-201ENST00000355530 C1orf100Q5SVJ3 147 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 ATPAF1Q5TC12 328 aaPredicted RBP16.36■□□□□ 0.21
SPNS3-201ENST00000355530 DNM1P34Q6PK57 102 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 ZNF704Q6ZNC4 412 aaPredicted RBP16.36■□□□□ 0.21
SPNS3-201ENST00000355530 Q6ZS52 159 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 C17orf82Q86X59 251 aaPredicted RBP16.36■□□□□ 0.21
SPNS3-201ENST00000355530 JAGN1Q8N5M9 183 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 STEAP2Q8NFT2 490 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 OR51A2Q8NGJ7 313 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 OR5M8Q8NGP6 311 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 CMKLR1Q99788 373 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 GLS2Q9UI32 602 aa16.36■□□□□ 0.21
SPNS3-201ENST00000355530 COA3Q9Y2R0 106 aaPredicted RBP16.36■□□□□ 0.21
SPNS3-201ENST00000355530 KNL1Q8NG31 2342 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 A0A1B0GW55 424 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 DCDC2BA2VCK2 349 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 A6NIZ1 184 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 SHISA7A6NL88 538 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 FADS1O60427 444 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 SPDEFO95238 335 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 DUX4L2P0CJ85 424 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 DUX4L3P0CJ86 424 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 DUX4L4P0CJ87 422 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 DUX4L5P0CJ88 424 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 DUX4L6P0CJ89 424 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 DUX4L7P0CJ90 424 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 MGMTP16455 207 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 ARRB1P49407 418 aaPredicted RBP16.35■□□□□ 0.21
SPNS3-201ENST00000355530 EFNA3P52797 238 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 RAP1BP61224 184 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 RAP1AP62834 184 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 NSDHLQ15738 373 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 BEST3Q8N1M1 668 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 SLC26A10Q8NG04 563 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 OR1N1Q8NGS0 311 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 OR1J2Q8NGS2 313 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 OR11A1Q9GZK7 315 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 DHCR7Q9UBM7 475 aaKnown RBP16.35■□□□□ 0.21
SPNS3-201ENST00000355530 DUX4Q9UBX2 424 aa16.35■□□□□ 0.21
SPNS3-201ENST00000355530 A0A0D9SG52 128 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 A0A1B0GTI1 187 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 OR6C76A6NM76 312 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 SDC3O75056 442 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 ZNF735P0CB33 412 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 ZNF823P16415 610 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 RAB6AP20340 208 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 FBLP22087 321 aaKnown RBP16.34■□□□□ 0.21
SPNS3-201ENST00000355530 SPOCK1Q08629 439 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 MEF2DQ14814 521 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 NR0B2Q15466 257 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 PAPD4Q6PIY7 484 aaKnown RBP16.34■□□□□ 0.21
SPNS3-201ENST00000355530 ZNF584Q8IVC4 421 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 BPIFB2Q8N4F0 458 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 GAL3ST1Q99999 423 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 SLC25A32Q9H2D1 315 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 G6PC2Q9NQR9 355 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 SLC2A4RGQ9NR83 387 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 OR52A1Q9UKL2 312 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 ALPK2Q86TB3 2170 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 KIF26BQ2KJY2 2108 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 RLN2P04090 185 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 SRSF4Q08170 494 aaKnown RBP16.34■□□□□ 0.21
SPNS3-201ENST00000355530 RAB30Q15771 203 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 PHF19Q5T6S3 580 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 RAB12Q6IQ22 244 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 ZNF546Q86UE3 836 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 ZNF441Q8N8Z8 693 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 ZNF248Q8NDW4 579 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 OR6S1Q8NH40 331 aa16.34■□□□□ 0.21
SPNS3-201ENST00000355530 FOXRED1Q96CU9 486 aaPredicted RBP16.34■□□□□ 0.21
SPNS3-201ENST00000355530 SLC2A8Q9NY64 477 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms