RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 WDR76Q9H967 626 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 FBXO34Q9NWN3 711 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 EDARQ9UNE0 448 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 ADAM18Q9Y3Q7 739 aa14.31□□□□□ -0.12
HMGA1-202ENST00000347617 TRBV6-7A0A0A0MS04 114 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 A0A1B0GVT2 93 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 TMEM72A0PK05 275 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 B4DGG1 531 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 ZNF736B4DX44 427 aaPredicted RBP14.3□□□□□ -0.12
HMGA1-202ENST00000347617 H0YGG7 62 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 SIGLEC5O15389 551 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 GPR75O95800 540 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 CRYBA1P05813 215 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 ZNF735P0CB33 412 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 SPP1P10451 314 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 MAGEB1P43366 347 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 PPICP45877 212 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 ARHGDIBP52566 201 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 ARF3P61204 181 aaPredicted RBP14.3□□□□□ -0.12
HMGA1-202ENST00000347617 SIGLEC14Q08ET2 396 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 PDZK1IP1Q13113 114 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 PEA15Q15121 130 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 ZNHIT3Q15649 155 aaPredicted RBP14.3□□□□□ -0.12
HMGA1-202ENST00000347617 ZNF141Q15928 474 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 ARHGAP40Q5TG30 622 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 CBLN2Q8IUK8 224 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 BAP18Q8IXM2 172 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 DEFB119Q8N690 84 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 C15orf54Q8N8G6 183 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 KDF1Q8NAX2 398 aaPredicted RBP14.3□□□□□ -0.12
HMGA1-202ENST00000347617 OR8S1Q8NH09 359 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 SLC25A28Q96A46 364 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 FOXRED1Q96CU9 486 aaPredicted RBP14.3□□□□□ -0.12
HMGA1-202ENST00000347617 PTCHD1Q96NR3 888 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 LMF2Q9BU23 707 aaKnown RBP14.3□□□□□ -0.12
HMGA1-202ENST00000347617 LAMP5Q9UJQ1 280 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 POMT1Q9Y6A1 747 aa14.3□□□□□ -0.12
HMGA1-202ENST00000347617 MEGF11A6BM72 1044 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 PRR32B1ATL7 298 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 BCAT2O15382 392 aaPredicted RBP14.29□□□□□ -0.12
HMGA1-202ENST00000347617 HLA-AP01891 365 aaKnown RBP14.29□□□□□ -0.12
HMGA1-202ENST00000347617 CD14P08571 375 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 GRK6P43250 576 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 RUNX2Q13950 521 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 SERTAD2Q14140 314 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 PRICKLE4Q2TBC4 344 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 RNF212Q495C1 297 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 CARFQ8N187 725 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 BPIFB2Q8N4F0 458 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 MAFAQ8NHW3 353 aaPredicted RBP14.29□□□□□ -0.12
HMGA1-202ENST00000347617 C4orf45Q96LM5 186 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 PTDSS2Q9BVG9 487 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 EGLN1Q9GZT9 426 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 UQCC1Q9NVA1 299 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 ZNF230Q9UIE0 474 aaPredicted RBP14.29□□□□□ -0.12
HMGA1-202ENST00000347617 TVP23AA6NH52 213 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 FADS1O60427 444 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 DCNP07585 359 aaKnown RBP14.29□□□□□ -0.12
HMGA1-202ENST00000347617 CX3CR1P49238 355 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 CENPAP49450 140 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 EMDP50402 254 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 EFNB2P52799 333 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 TAS2R31P59538 309 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 EML5Q05BV3 1969 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 ECH1Q13011 328 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 PLA2G7Q13093 441 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 AIMP2Q13155 320 aaKnown RBP14.29□□□□□ -0.12
HMGA1-202ENST00000347617 HMGN3Q15651 99 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 YOD1Q5VVQ6 348 aaPredicted RBP14.29□□□□□ -0.12
HMGA1-202ENST00000347617 TMEM71Q6P5X7 295 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 KIRREL2Q6UWL6 708 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 OR4K17Q8NGC6 315 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 RXFP4Q8TDU9 374 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 TSEN15Q8WW01 171 aaKnown RBP14.29□□□□□ -0.12
HMGA1-202ENST00000347617 OIT3Q8WWZ8 545 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 RASD2Q96D21 266 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 TCTN2Q96GX1 697 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 TREM1Q9NP99 234 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 PRDM6Q9NQX0 595 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 SMCO4Q9NRQ5 59 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 CKLFQ9UBR5 152 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 IKZF2Q9UKS7 526 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 HIF3AQ9Y2N7 669 aa14.29□□□□□ -0.12
HMGA1-202ENST00000347617 CEP192Q8TEP8 1941 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 C1orf196B1AJZ1 125 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 ZNF208O43345 1280 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 PIAS2O75928 621 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 FABP1P07148 127 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 FSTP19883 344 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 TBPP20226 339 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 BCKDHBP21953 392 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 PSMB6P28072 239 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 SDHAP31040 664 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 CAPZBP47756 277 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 SLC6A9P48067 706 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 PNLIPRP2P54317 469 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 ATP1B3P54709 279 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 NKPD1Q17RQ9 610 aa14.28□□□□□ -0.12
HMGA1-202ENST00000347617 EIF5AL1Q6IS14 154 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms