RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SPACA1Q9HBV2 294 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 NPAP1Q9NZP6 1156 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 RHBDD3Q9Y3P4 386 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 PLXNB2O15031 1838 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 OR5H15A6NDH6 313 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 NDUFB3O43676 98 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 LRP3O75074 770 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 FPR3P25089 353 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 NFYBP25208 207 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 GDNFP39905 211 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 AGFG1P52594 562 aaKnown RBP9.9□□□□□ -0.82
CLCN6-202ENST00000346436 AGERQ15109 404 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 CCDC71Q8IV32 467 aaPredicted RBP9.9□□□□□ -0.82
CLCN6-202ENST00000346436 BEST3Q8N1M1 668 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 OR10X1Q8NGY0 326 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 CCL4L1Q8NHW4 92 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 C1QTNF6Q9BXI9 259 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 SEMA4CQ9C0C4 833 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 MYOZ1Q9NP98 299 aaPredicted RBP9.9□□□□□ -0.82
CLCN6-202ENST00000346436 A0A1B0GWA3 101 aa9.9□□□□□ -0.83
CLCN6-202ENST00000346436 F5H0A9 414 aaPredicted RBP9.9□□□□□ -0.83
CLCN6-202ENST00000346436 SELENOFO60613 162 aa9.9□□□□□ -0.83
CLCN6-202ENST00000346436 UBL3O95164 117 aa9.9□□□□□ -0.83
CLCN6-202ENST00000346436 LRRC56Q8IYG6 542 aaPredicted RBP9.9□□□□□ -0.83
CLCN6-202ENST00000346436 CT55Q8WUE5 264 aa9.9□□□□□ -0.83
CLCN6-202ENST00000346436 ZG16BQ96DA0 208 aa9.9□□□□□ -0.83
CLCN6-202ENST00000346436 GON7Q9BXV9 100 aa9.9□□□□□ -0.83
CLCN6-202ENST00000346436 SRRQ9GZT4 340 aa9.9□□□□□ -0.83
CLCN6-202ENST00000346436 CHST11Q9NPF2 352 aa9.9□□□□□ -0.83
CLCN6-202ENST00000346436 PLA2G3Q9NZ20 509 aa9.9□□□□□ -0.83
CLCN6-202ENST00000346436 SSUH2Q9Y2M2 353 aa9.9□□□□□ -0.83
CLCN6-202ENST00000346436 HDGFL3Q9Y3E1 203 aa9.9□□□□□ -0.83
CLCN6-202ENST00000346436 V9GY05 133 aa9.9□□□□□ -0.83
CLCN6-202ENST00000346436 IGLV3-16A0A075B6K0 115 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 CRYM-AS1A6NIL9 109 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 CX3CR1P49238 355 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 VEGFCP49767 419 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 FXYD4P59646 89 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 FZD2Q14332 565 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 BEX5Q5H9J7 111 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 EXOSC6Q5RKV6 272 aaKnown RBP9.89□□□□□ -0.83
CLCN6-202ENST00000346436 FAM198BQ6UWH4 519 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 CCDC190Q86UF4 302 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 RASD2Q96D21 266 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 CNRIP1Q96F85 164 aaPredicted RBP9.89□□□□□ -0.83
CLCN6-202ENST00000346436 S1PR5Q9H228 398 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 DUSP22Q9NRW4 184 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 PCDHGA1Q9Y5H4 931 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 LRP5LA4QPB2 252 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 GPR137BO60478 399 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 TCRBP04435 133 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 AQP2P41181 271 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 TAS2R31P59538 309 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 SFTPA1Q8IWL2 248 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 RPP25Q9BUL9 199 aaKnown RBP9.89□□□□□ -0.83
CLCN6-202ENST00000346436 NOX4Q9NPH5 578 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 HAX1O00165 279 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 S100A6P06703 90 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 LSM11P83369 360 aaKnown RBP eCLIP9.89□□□□□ -0.83
CLCN6-202ENST00000346436 C19orf48Q6RUI8 117 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 TOMM40LQ969M1 308 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 FN3KRPQ9HA64 309 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 A4GNTQ9UNA3 340 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 COPS3Q9UNS2 423 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 PARP14Q460N5 1801 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 CFAP77Q6ZQR2 320 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 PXKQ7Z7A4 578 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 FAM109AQ8N4B1 249 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 ZFAND1Q8TCF1 268 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 SORCS2Q96PQ0 1159 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 LAT2Q9GZY6 243 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 OSGIN2Q9Y236 505 aa9.89□□□□□ -0.83
CLCN6-202ENST00000346436 GPR55Q9Y2T6 319 aaPredicted RBP9.89□□□□□ -0.83
CLCN6-202ENST00000346436 SERTM1A2A2V5 107 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 SLC22A5O76082 557 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 HLA-DMAP28067 261 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 PRKAR1BP31321 381 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 ARF1P84077 181 aaKnown RBP9.88□□□□□ -0.83
CLCN6-202ENST00000346436 ASAH1Q13510 395 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 ALKAL2Q6UX46 152 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 OR2A14Q96R47 310 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 TMEM129A0AVI4 362 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 EDDM3AQ14507 147 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 KRTCAP3Q53RY4 240 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 FAAP20Q6NZ36 180 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 TMEM92Q6UXU6 159 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 NRSN2Q9GZP1 204 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 FBXO7Q9Y3I1 522 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 LSSP48449 732 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 MTNR1BP49286 362 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 GZMMP51124 257 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 RPL23AP62750 156 aaKnown RBP9.88□□□□□ -0.83
CLCN6-202ENST00000346436 RNF4P78317 190 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 DGCR2P98153 550 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 DUSP2Q05923 314 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 KLRB1Q12918 225 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 METTL11BQ5VVY1 283 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 OR4A16Q8NH70 328 aa9.88□□□□□ -0.83
CLCN6-202ENST00000346436 EMG1Q92979 244 aaKnown RBP9.88□□□□□ -0.83
CLCN6-202ENST00000346436 TSSK2Q96PF2 358 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms