RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 MOKQ9UQ07 419 aa13.97□□□□□ -0.17
RAB5C-201ENST00000346213 AMDHD2Q9Y303 409 aa13.97□□□□□ -0.17
RAB5C-201ENST00000346213 ARPC4-TTLL3A0A0A6YYG9 625 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 IGKV1D-43A0A0B4J1Z2 117 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 OR7A10O76100 309 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 GABARAPO95166 117 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 PTHP01270 115 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 IGLV1-44P01699 117 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 IGHV4-39P01824 125 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 F13BP05160 661 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 ADRA2AP08913 450 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 CECR9P0C854 216 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 SAGP10523 405 aaPredicted RBP13.96□□□□□ -0.17
RAB5C-201ENST00000346213 AQP2P41181 271 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 RPL18Q07020 188 aaKnown RBP13.96□□□□□ -0.17
RAB5C-201ENST00000346213 ZP4Q12836 540 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 MSMPQ1L6U9 139 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 AADACL4Q5VUY2 407 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 LRFN4Q6PJG9 635 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 KLHL24Q6TFL4 600 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 TMEM108Q6UXF1 575 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 ZNF367Q7RTV3 350 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 LNX2Q8N448 690 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 OR13C2Q8NGS9 318 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 TMEM54Q969K7 222 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 SGTBQ96EQ0 304 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 FN3KQ9H479 309 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 NGBQ9NPG2 151 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 NANSQ9NR45 359 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 CRNNQ9UBG3 495 aaPredicted RBP13.96□□□□□ -0.17
RAB5C-201ENST00000346213 ZNF229Q9UJW7 825 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.96□□□□□ -0.17
RAB5C-201ENST00000346213 BAIAP2Q9UQB8 552 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 NOX1Q9Y5S8 564 aa13.96□□□□□ -0.17
RAB5C-201ENST00000346213 PLCE1Q9P212 2302 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 KRT33AO76009 404 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 PTAFRP25105 342 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 TGFBR2P37173 567 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 SLC9A3P48764 834 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 MFSD13AQ14CX5 517 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 CTF1Q16619 201 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 TIGD6Q17RP2 521 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 MST1LQ2TV78 715 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 ANKRD16Q6P6B7 361 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 SLC22A25Q6T423 547 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 Q71RC1 249 aaPredicted RBP13.95□□□□□ -0.18
RAB5C-201ENST00000346213 SLC35D2Q76EJ3 337 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 OAFQ86UD1 273 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 TMEM171Q8WVE6 324 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 RFKQ969G6 155 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 FGF20Q9NP95 211 aaPredicted RBP13.95□□□□□ -0.18
RAB5C-201ENST00000346213 B3GNT2Q9NY97 397 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 ARID1AO14497 2285 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 NIPBLQ6KC79 2804 aaeCLIP13.95□□□□□ -0.18
RAB5C-201ENST00000346213 A0A1W2PPW3 197 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 HLA-HP01893 362 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 PATE4P0C8F1 98 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 PGA4P0DJD7 388 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 PGA3P0DJD8 388 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 B4GALT1P15291 398 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 CD36P16671 472 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 PRPS1P60891 318 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 RPS4XP62701 263 aaKnown RBP13.95□□□□□ -0.18
RAB5C-201ENST00000346213 HGFACQ04756 655 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 RAB40BQ12829 278 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 NXNL2Q5VZ03 156 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 THSD4Q6ZMP0 1018 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 MDP1Q86V88 176 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 GPR137CQ8N3F9 429 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 OR52I1Q8NGK6 324 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 MS4A3Q96HJ5 214 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 RACGAP1Q9H0H5 632 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 IL20RAQ9UHF4 553 aa13.95□□□□□ -0.18
RAB5C-201ENST00000346213 DIMT1Q9UNQ2 313 aaKnown RBP13.95□□□□□ -0.18
RAB5C-201ENST00000346213 TRAV27A0A087WT01 109 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 BLOC1S5-TXNDC5H3BN57 136 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 H7C1Q1 480 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 RAB36O95755 333 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 IGKV3-15P01624 115 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 LIPAP38571 399 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 TGFBR3Q03167 851 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 IGFN1Q86VF2 1251 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 LRRC75AQ8NAA5 344 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 OR51A7Q8NH64 312 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 LIPHQ8WWY8 451 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 LGALS12Q96DT0 336 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 COX4I2Q96KJ9 171 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 TNFRSF13CQ96RJ3 184 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 CMC2Q9NRP2 79 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 EDARQ9UNE0 448 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 ERGIC3Q9Y282 383 aa13.94□□□□□ -0.18
RAB5C-201ENST00000346213 LSM2Q9Y333 95 aaKnown RBP13.94□□□□□ -0.18
RAB5C-201ENST00000346213 SLC22A1O15245 554 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 RNF13O43567 381 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 LY6HO94772 140 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 SLC2A10O95528 541 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 SLC6A6P31641 620 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 ACVR1BP36896 505 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 MTNR1AP48039 350 aa13.93□□□□□ -0.18
RAB5C-201ENST00000346213 ATP5J2P56134 94 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms