RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ANKRD16Q6P6B7 361 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 MISPQ8IVT2 679 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 SUMF1Q8NBK3 374 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 ELF4Q99607 663 aaPredicted RBP16.51■□□□□ 0.23
SMC4-201ENST00000344722 HRH1P35367 487 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 DVL1P1P54792 670 aaPredicted RBP16.51■□□□□ 0.23
SMC4-201ENST00000344722 RANP62826 216 aaKnown RBP16.51■□□□□ 0.23
SMC4-201ENST00000344722 HNF4GQ14541 408 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 GPR137Q96N19 417 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 TMPRSS11DO60235 418 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 GLSO94925 669 aaPredicted RBP16.51■□□□□ 0.23
SMC4-201ENST00000344722 SLC16A13Q7RTY0 426 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 C22orf15Q8WYQ4 148 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 ARV1Q9H2C2 271 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 LRP5LA4QPB2 252 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 LIMS3P0CW19 117 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 LIMS4P0CW20 117 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 DSC1Q08554 894 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 MED25Q71SY5 747 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 NUDT22Q9BRQ3 303 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 JAM3Q9BX67 310 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 MED9Q9NWA0 146 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 ELF5Q9UKW6 265 aaPredicted RBP16.51■□□□□ 0.23
SMC4-201ENST00000344722 CLDN1O95832 211 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 P04436 131 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 GABREP78334 506 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 ZNF684Q5T5D7 378 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 MARCH1Q8TCQ1 289 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 RNF150Q9ULK6 438 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 OSGIN2Q9Y236 505 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 KIF13AQ9H1H9 1805 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 A0A1W2PR48 441 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 OR6C68A6NDL8 312 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 SULT1A3P0DMM9 295 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 SULT1A4P0DMN0 295 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 AKR1C3P42330 323 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 CTBSQ01459 385 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 LYPD8Q6UX82 237 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 TMEFF1Q8IYR6 380 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 FBXL6Q8N531 539 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 SFXN1Q9H9B4 322 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 IL20Q9NYY1 176 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 BTBD17A6NE02 478 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 ZNF727A8MUV8 499 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 CD300LDQ6UXZ3 194 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 VPS25Q9BRG1 176 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 MIXL1Q9H2W2 232 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 CRLF2Q9HC73 371 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 LYRM4Q9HD34 91 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 RYDENQ9NUL5 291 aaKnown RBP16.5■□□□□ 0.23
SMC4-201ENST00000344722 PDGFBP01127 241 aaPredicted RBP16.5■□□□□ 0.23
SMC4-201ENST00000344722 BSGP35613 385 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 WNT3P56703 355 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 C4orf17Q53FE4 359 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 MUC20Q8N307 709 aaPredicted RBP16.5■□□□□ 0.23
SMC4-201ENST00000344722 OR10D4PQ8NGN7 298 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 GDF2Q9UK05 429 aaPredicted RBP16.5■□□□□ 0.23
SMC4-201ENST00000344722 CCDC85CA6NKD9 419 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 MAN2B1O00754 1011 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 PLA2G10O15496 165 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 SELENOPP49908 381 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 KIAA0040Q15053 153 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 OR5L1Q8NGL2 311 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 ZNF2Q9BSG1 426 aaPredicted RBP16.5■□□□□ 0.23
SMC4-201ENST00000344722 SLC17A5Q9NRA2 495 aa16.5■□□□□ 0.23
SMC4-201ENST00000344722 MFAP5Q13361 173 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 ZFP62Q8NB50 900 aaPredicted RBP16.49■□□□□ 0.23
SMC4-201ENST00000344722 UBAC2Q8NBM4 344 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 BANF2Q9H503 90 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 ZNF98A6NK75 572 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 ZFPM2Q8WW38 1151 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 DAZAP1Q96EP5 407 aaKnown RBP16.49■□□□□ 0.23
SMC4-201ENST00000344722 PIGQQ9BRB3 760 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 ULBP2Q9BZM5 246 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 OR51I2Q9H344 312 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 C11orf49Q9H6J7 331 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 SLC23A2Q9UGH3 650 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 FLVCR1Q9Y5Y0 555 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 A8MVM7 634 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 RAB27BO00194 218 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 HCRTR1O43613 425 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 GSTZ1O43708 216 aaPredicted RBP16.49■□□□□ 0.23
SMC4-201ENST00000344722 GRB2P62993 217 aaKnown RBP16.49■□□□□ 0.23
SMC4-201ENST00000344722 TOMM34Q15785 309 aaPredicted RBP16.49■□□□□ 0.23
SMC4-201ENST00000344722 TCTN2Q96GX1 697 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 IGLV3-27P01718 113 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 GABRA1P14867 456 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 GUK1Q16774 197 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 MAMSTRQ6ZN01 415 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 ZDHHC22Q8N966 263 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 DTWD2Q8NBA8 298 aa16.49■□□□□ 0.23
SMC4-201ENST00000344722 COA3Q9Y2R0 106 aaPredicted RBP16.49■□□□□ 0.23
SMC4-201ENST00000344722 LRP3O75074 770 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 GLAP06280 429 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 APLNRP35414 380 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 BIDP55957 195 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 SCGB2A2Q13296 93 aa16.48■□□□□ 0.23
SMC4-201ENST00000344722 LGALSLQ3ZCW2 172 aaPredicted RBP16.48■□□□□ 0.23
SMC4-201ENST00000344722 TMEM128Q5BJH2 165 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms