RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PDCD11Q14690 1871 aaKnown RBP16.26■□□□□ 0.19
SMAD4-201ENST00000342988 TUBGCP6Q96RT7 1819 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 CHRM2P08172 466 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 CD200P41217 278 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 GALR1P47211 349 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 MTNR1BP49286 362 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 ILKQ13418 452 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 MARCH5Q9NX47 278 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 NDRG3Q9UGV2 375 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 DUSP13Q9UII6 198 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 PPP1R3CQ9UQK1 317 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 ZNF814B7Z6K7 855 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 GRPP07492 148 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 CLDN17P56750 224 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 RBPMS2Q6ZRY4 209 aaKnown RBP16.26■□□□□ 0.19
SMAD4-201ENST00000342988 YRDCQ86U90 279 aaKnown RBP16.26■□□□□ 0.19
SMAD4-201ENST00000342988 MRPS24Q96EL2 167 aaKnown RBP16.26■□□□□ 0.19
SMAD4-201ENST00000342988 DRGXA6NNA5 263 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 SGK494L7N484 410 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 MARCH8Q5T0T0 291 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 SLC26A10Q8NG04 563 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 DDOQ99489 341 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 SEBOXQ9HB31 216 aaPredicted RBP16.26■□□□□ 0.19
SMAD4-201ENST00000342988 SCN4AP35499 1836 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 RBP2P50120 134 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 NPY4RP50391 375 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 SIRPAP78324 504 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 MS4A2Q01362 244 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 GLYATL3Q5SZD4 288 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 AAED1Q7RTV5 226 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 SYT9Q86SS6 491 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 FAM131CQ96AQ9 280 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 B3GALT5Q9Y2C3 310 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 WDR81Q562E7 1941 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 GYPBP06028 91 aa16.26■□□□□ 0.19
SMAD4-201ENST00000342988 OTUD1Q5VV17 481 aaPredicted RBP16.26■□□□□ 0.19
SMAD4-201ENST00000342988 GPR32O75388 356 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 FAM87AP0C7U9 286 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 RGRP47804 291 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 RPS16P62249 146 aaKnown RBP16.25■□□□□ 0.19
SMAD4-201ENST00000342988 INPP5JQ15735 1006 aaPredicted RBP16.25■□□□□ 0.19
SMAD4-201ENST00000342988 ZDHHC24Q6UX98 284 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 RPS27LQ71UM5 84 aaKnown RBP16.25■□□□□ 0.19
SMAD4-201ENST00000342988 PNPLA1Q8N8W4 532 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 HPP00738 406 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 LRFN3Q9BTN0 628 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 MCM3APO60318 1980 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 HOXA10P31260 410 aaPredicted RBP16.25■□□□□ 0.19
SMAD4-201ENST00000342988 CORO6Q6QEF8 472 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 TMEM147Q9BVK8 224 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 HSFX1Q9UBD0 423 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 NEURL1O76050 574 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 CD226Q15762 336 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 RPEL1Q2QD12 228 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 COL5A2P05997 1499 aaPredicted RBP16.25■□□□□ 0.19
SMAD4-201ENST00000342988 FAM208AQ9UK61 1670 aaKnown RBP16.25■□□□□ 0.19
SMAD4-201ENST00000342988 ABCA7Q8IZY2 2146 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 PCBP4P57723 403 aaKnown RBP16.25■□□□□ 0.19
SMAD4-201ENST00000342988 SLC35E4Q6ICL7 350 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 FAM3DQ96BQ1 224 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 SOD2P04179 222 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 LAMP1P11279 417 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 SSX1Q16384 188 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 DPPA4Q7L190 304 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 LRP11Q86VZ4 500 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 OR4F17Q8NGA8 305 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 IL37Q9NZH6 218 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 GPR55Q9Y2T6 319 aaPredicted RBP16.25■□□□□ 0.19
SMAD4-201ENST00000342988 SMCHD1A6NHR9 2005 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 RD3LP0DJH9 198 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 HTR1DP28221 377 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 CYHR1Q6ZMK1 362 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 LYSMD2Q8IV50 215 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 GALMQ96C23 342 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 AGPAT4Q9NRZ5 378 aa16.25■□□□□ 0.19
SMAD4-201ENST00000342988 TIAM2Q8IVF5 1701 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 SDHDO14521 159 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 IL1R2P27930 398 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 RELBQ01201 579 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 BCL7AQ4VC05 210 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 SYT17Q9BSW7 474 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 KIAA1024LP59773 190 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 ZNF528Q3MIS6 628 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 CLLU1Q5K131 121 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 OR5AP2Q8NGF4 316 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 FLVCR1Q9Y5Y0 555 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 EFSO43281 561 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 SMPD1P17405 629 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 TCN2P20062 427 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 SLC39A11Q8N1S5 342 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 GPX7Q96SL4 187 aaPredicted RBP16.24■□□□□ 0.19
SMAD4-201ENST00000342988 EDN1P05305 212 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 LSM11P83369 360 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMAD4-201ENST00000342988 ZP2Q05996 745 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 TMEM123Q8N131 208 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 OR6M1Q8NGM8 313 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 EID2BQ96D98 161 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 NSUN5Q96P11 429 aaKnown RBP16.24■□□□□ 0.19
SMAD4-201ENST00000342988 NDUFB11Q9NX14 153 aa16.24■□□□□ 0.19
SMAD4-201ENST00000342988 NXT1Q9UKK6 140 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms