RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TMEM234Q8WY98 164 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 CDC6Q99741 560 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 SDHAF3Q9NRP4 125 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 SEMA5BQ9P283 1151 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 NXT1Q9UKK6 140 aaKnown RBP11.74□□□□□ -0.53
COL18A1-201ENST00000342220 CCDC187A0A096LP49 1063 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 DCDC2BA2VCK2 349 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 DCTN6O00399 190 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 IGHV3-9P01782 118 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 P04436 131 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 COX6A1P12074 109 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 ZNF85Q03923 595 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 FMODQ06828 376 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 NTRK2Q16620 822 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 DMRTC1Q5HYR2 192 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 ABHD17BQ5VST6 288 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 EEF1A1P5Q5VTE0 462 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 SSX6Q7RTT6 188 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 DPY19L4Q7Z388 723 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 NUP54Q7Z3B4 507 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 ATG4DQ86TL0 474 aaPredicted RBP11.73□□□□□ -0.53
COL18A1-201ENST00000342220 OR5J2Q8NH18 312 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 HSD17B8Q92506 261 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 ADAD1Q96M93 576 aaKnown RBP11.73□□□□□ -0.53
COL18A1-201ENST00000342220 TGIF2Q9GZN2 237 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 CMC2Q9NRP2 79 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 NUDT15Q9NV35 164 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 IGHV1-45A0A0A0MS14 117 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 A0A0G2JMM0 328 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 A0A1W2PPB8 328 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 A0A1W2PRS3 328 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 KIR3DP1A8MWS1 328 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 NPR2P20594 1047 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 SLC22A10Q63ZE4 541 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 LRRC69Q6ZNQ3 347 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 BEST3Q8N1M1 668 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 ADGRL4Q9HBW9 690 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 CHRNA9Q9UGM1 479 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 A0A1B0GTH9 108 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 TMEM200CA6NKL6 621 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 NPIPA5E9PKD4 350 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 DNASE2O00115 360 aaPredicted RBP11.73□□□□□ -0.53
COL18A1-201ENST00000342220 PLPP2O43688 288 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 FZD7O75084 574 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 CD3GP09693 182 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 SBK2P0C263 348 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 TMPRSS11FQ6ZWK6 438 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 MAMDC2Q7Z304 686 aaPredicted RBP11.73□□□□□ -0.53
COL18A1-201ENST00000342220 COQ8AQ8NI60 647 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 GSN-AS1Q9NRJ2 163 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 NPIPA1Q9UND3 350 aa11.73□□□□□ -0.53
COL18A1-201ENST00000342220 DSPP15924 2871 aaKnown RBP11.72□□□□□ -0.53
COL18A1-201ENST00000342220 MFSD2BA6NFX1 497 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 SLC22A31A6NKX4 558 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 ATG12O94817 140 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 MPZL1O95297 269 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 IFNGR1P15260 489 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 POLR2HP52434 150 aaKnown RBP11.72□□□□□ -0.53
COL18A1-201ENST00000342220 BTG1P62324 171 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 PLGLB1Q02325 96 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 ACKR1Q16570 336 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 ACSM3Q53FZ2 586 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 ARHGAP11AQ6P4F7 1023 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 ESPNLQ6ZVH7 1005 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 LINC00346Q8IVM7 164 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 ZNF433Q8N7K0 673 aaPredicted RBP11.72□□□□□ -0.53
COL18A1-201ENST00000342220 SUMF1Q8NBK3 374 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 PGLYRP3Q96LB9 341 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 REG4Q9BYZ8 158 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 OR8G3PP0DMU2 310 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 GDF1P27539 372 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 SLC6A8P48029 635 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 ZNF528Q3MIS6 628 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 PAN3Q58A45 887 aaKnown RBP11.72□□□□□ -0.53
COL18A1-201ENST00000342220 PLA2G2CQ5R387 149 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 C9orf135Q5VTT2 229 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 PEAR1Q5VY43 1037 aaPredicted RBP11.72□□□□□ -0.53
COL18A1-201ENST00000342220 MTFR2Q6P444 385 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 OPN5Q6U736 354 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 GRINAQ7Z429 371 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 CMIPQ8IY22 773 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 PIAS4Q8N2W9 510 aaPredicted RBP11.72□□□□□ -0.53
COL18A1-201ENST00000342220 OR11H7Q8NGC8 314 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 GHSRQ92847 366 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 KCTD12Q96CX2 325 aaKnown RBP11.72□□□□□ -0.53
COL18A1-201ENST00000342220 LRFN1Q9P244 771 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 WIF1Q9Y5W5 379 aa11.72□□□□□ -0.53
COL18A1-201ENST00000342220 SULT2B1O00204 365 aa11.71□□□□□ -0.53
COL18A1-201ENST00000342220 PDCD5O14737 125 aa11.71□□□□□ -0.53
COL18A1-201ENST00000342220 NKX2-8O15522 239 aa11.71□□□□□ -0.53
COL18A1-201ENST00000342220 FADS1O60427 444 aa11.71□□□□□ -0.53
COL18A1-201ENST00000342220 RGS11O94810 467 aa11.71□□□□□ -0.53
COL18A1-201ENST00000342220 GP1BAP07359 652 aa11.71□□□□□ -0.53
COL18A1-201ENST00000342220 ANXA3P12429 323 aa11.71□□□□□ -0.53
COL18A1-201ENST00000342220 SNRPBP14678 240 aaKnown RBP11.71□□□□□ -0.53
COL18A1-201ENST00000342220 SGCBQ16585 318 aa11.71□□□□□ -0.53
COL18A1-201ENST00000342220 HYAL4Q2M3T9 481 aa11.71□□□□□ -0.53
COL18A1-201ENST00000342220 SLC36A2Q495M3 483 aa11.71□□□□□ -0.53
COL18A1-201ENST00000342220 ACER2Q5QJU3 275 aa11.71□□□□□ -0.53
COL18A1-201ENST00000342220 NDUFAF7Q7L592 441 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms