RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 KRT77Q7Z794 578 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 SNAPC3Q92966 411 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 ARL5BQ96KC2 179 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 IMMP1LQ96LU5 166 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 SPRY4Q9C004 299 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 ZNF160Q9HCG1 818 aa13.43□□□□□ -0.26
TPM3-208ENST00000341485 SSNA1O43805 119 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 ALX3O95076 343 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 CELA2AP08217 269 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 FBXO45P0C2W1 286 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 CFPP27918 469 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 VEGFCP49767 419 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 ZP1P60852 638 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 PUDPQ08623 228 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 SSPNQ14714 243 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 ARSKQ6UWY0 536 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 CATSPERDQ86XM0 798 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 OR51D1Q8NGF3 324 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 OR6S1Q8NH40 331 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 ASB10Q8WXI3 467 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 ST8SIA1Q92185 356 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 NXPE2Q96DL1 559 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 KCNK15Q9H427 330 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 MED11Q9P086 117 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 EMC3Q9P0I2 261 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 SLC23A1Q9UHI7 598 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 LRP12Q9Y561 859 aa13.42□□□□□ -0.26
TPM3-208ENST00000341485 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 ARPC1BO15143 372 aaKnown RBP13.41□□□□□ -0.26
TPM3-208ENST00000341485 XRCC3O43542 346 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 TPPPO94811 219 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 CRABP1P29762 137 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 RIDAP52758 137 aaKnown RBP13.41□□□□□ -0.26
TPM3-208ENST00000341485 C17orf67Q0P5P2 114 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 ZP4Q12836 540 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 OR7A5Q15622 319 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 KCTD18Q6PI47 426 aaPredicted RBP13.41□□□□□ -0.26
TPM3-208ENST00000341485 Q6ZTK2 550 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 LUZP2Q86TE4 346 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 BIVMQ86UB2 503 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 CDH24Q86UP0 819 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 C15orf40Q8WUR7 153 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 TTC9Q92623 222 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 THRSPQ92748 146 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 GPR137Q96N19 417 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 DLL4Q9NR61 685 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 KLRF1Q9NZS2 232 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 CACNA1HO95180 2353 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 A0A1B0GVI7 797 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 SRSF10O75494 262 aaKnown RBP13.41□□□□□ -0.26
TPM3-208ENST00000341485 TGM6O95932 706 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 ITGA5P08648 1049 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 PTGS2P35354 604 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 DLSTP36957 453 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 POU3F4P49335 361 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 GLO1Q04760 184 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 FMODQ06828 376 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 FOXF1Q12946 379 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 LINC00303Q3SY05 128 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 ANKRD16Q6P6B7 361 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 SEZ6L2Q6UXD5 910 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 ZNF767PQ75MW2 155 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 PPP1R32Q7Z5V6 425 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 ZNF454Q8N9F8 522 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 OR52N5Q8NH56 324 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 MFSD8Q8NHS3 518 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 RASL10BQ96S79 203 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 VDAC3Q9Y277 283 aa13.41□□□□□ -0.26
TPM3-208ENST00000341485 A0A1B0GUH1 482 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 A6NIZ1 184 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 SHISA8B8ZZ34 492 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 PRAF2O60831 178 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 CTAG2O75638 210 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 ALDOBP05062 364 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 IFNGR1P15260 489 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 APOBEC1P41238 236 aaKnown RBP13.4□□□□□ -0.26
TPM3-208ENST00000341485 RAD52P43351 418 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 MAP2K6P52564 334 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 SUMO3P55854 103 aaPredicted RBP13.4□□□□□ -0.26
TPM3-208ENST00000341485 RAP1BP61224 184 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 RAP1AP62834 184 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 CAMK2DQ13557 499 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 RAB11BQ15907 218 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 FAM166AQ6J272 317 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 H1FNTQ75WM6 255 aaPredicted RBP13.4□□□□□ -0.26
TPM3-208ENST00000341485 ZNF248Q8NDW4 579 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 SLC26A10Q8NG04 563 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 RNF138Q8WVD3 245 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 ASB5Q8WWX0 329 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 NKX3-1Q99801 234 aaPredicted RBP13.4□□□□□ -0.26
TPM3-208ENST00000341485 METTL7AQ9H8H3 244 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 PTTG3PQ9NZH4 202 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 FBXL3Q9UKT7 428 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 DHDHQ9UQ10 334 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 NPTNQ9Y639 398 aa13.4□□□□□ -0.26
TPM3-208ENST00000341485 IGKV1D-43A0A0B4J1Z2 117 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 GGT3PA6NGU5 568 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 TTLL8A6PVC2 850 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 NPIPA5E9PKD4 350 aa13.4□□□□□ -0.27
TPM3-208ENST00000341485 SLC17A2O00624 439 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms