RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 HOXB6P17509 224 aaKnown RBP11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 ACHEP22303 614 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 CCNOP22674 350 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 LIPAP38571 399 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 ALDH3B1P43353 468 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 MAGEA2P43356 314 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 ARHGDIAP52565 204 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 CHN2P52757 468 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 HMGA2P52926 109 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 FXYD6P3P58550 94 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 LCN6P62502 163 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 AQP6Q13520 282 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 ENDOGQ14249 297 aaKnown RBP11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 TRIM25Q14258 630 aaKnown RBP11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 GGTLC2Q14390 218 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 ZNF718Q3SXZ3 478 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 FAM209AQ5JX71 171 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 LCN8Q6JVE9 175 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 C1orf94Q6P1W5 598 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 ZER1Q7Z7L7 766 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 LRP11Q86VZ4 500 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 DHFR2Q86XF0 187 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 ZCCHC24Q8N2G6 241 aaKnown RBP11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 OR1J1Q8NGS3 322 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 AKR7LQ8NHP1 331 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 HPS1Q92902 700 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 RASD2Q96D21 266 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 TRIM15Q9C019 465 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 BPESC1Q9GZL8 116 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 WNT5BQ9H1J7 359 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 SYT4Q9H2B2 425 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 OR52D1Q9H346 318 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 CHODLQ9H9P2 273 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 HINT3Q9NQE9 182 aaKnown RBP11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 YAE1D1Q9NRH1 226 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 NKIRAS2Q9NYR9 191 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 NKX1-2Q9UD57 310 aaPredicted RBP11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 CGGBP1Q9UFW8 167 aaPredicted RBP11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 ATPIF1Q9UII2 106 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 IER3IP1Q9Y5U9 82 aa11.43□□□□□ -0.58
SIRPB3P-201ENST00000340424 LOC100509620A0A075B734 347 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 C17orf100A8MU93 164 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 SLC16A7O60669 478 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 TACSTD2P09758 323 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 IGHV4-31P0DP07 118 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 GCH1P30793 250 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 GSSP48637 474 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 TSPAN31Q12999 210 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 RIN1Q13671 783 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 GK3PQ14409 553 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 KCNMB1Q16558 191 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 DNAL1Q4LDG9 190 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 MBNL2Q5VZF2 373 aaKnown RBP11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 TMEM154Q6P9G4 183 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 JAZF1Q86VZ6 243 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 HIPK1Q86Z02 1210 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 NPEPL1Q8NDH3 523 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 GNPDA2Q8TDQ7 276 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 IPCEF1Q8WWN9 437 aaPredicted RBP11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 RDH5Q92781 318 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 ASB9Q96DX5 294 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 COG8Q96MW5 612 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 GPA33Q99795 319 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 TPK1Q9H3S4 243 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 CYSLTR2Q9NS75 346 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 TAS2R1Q9NYW7 299 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 TAAR3PQ9P1P4 343 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 MYEF2Q9P2K5 600 aaKnown RBP11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 LPAR3Q9UBY5 353 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 CDC42EP3Q9UKI2 254 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 FZR1Q9UM11 496 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 LYVE1Q9Y5Y7 322 aa11.42□□□□□ -0.58
SIRPB3P-201ENST00000340424 IGHV4-61A0A0C4DH41 118 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 A6NHS1 94 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 J3QW42 95 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 SOCS2O14508 198 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 GYG2O15488 501 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 SGCEO43556 437 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 DOK2O60496 412 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 RENP00797 406 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 ATP6V1B2P21281 511 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 NOS3P29474 1203 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 VHLP40337 213 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 WNT5AP41221 380 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 TMEM33P57088 247 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 TEKQ02763 1124 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 MAD2L1BPQ15013 274 aaPredicted RBP11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 FAM98BQ52LJ0 330 aaKnown RBP11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 ZMAT1Q5H9K5 638 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 FAM166AQ6J272 317 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 ZNF774Q6NX45 483 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 CYP2R1Q6VVX0 501 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 ZNF620Q6ZNG0 422 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 ZNF101Q8IZC7 436 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 ICA1LQ8NDH6 482 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 MARS2Q96GW9 593 aaKnown RBP11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 C4orf45Q96LM5 186 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 ERMAPQ96PL5 475 aaPredicted RBP11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 RACGAP1Q9H0H5 632 aa11.41□□□□□ -0.58
SIRPB3P-201ENST00000340424 OR51B6Q9H340 312 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms