RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TAS2R43P59537 309 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 BDH1Q02338 343 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 TLE1Q04724 770 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 MED22Q15528 200 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 SLC36A2Q495M3 483 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 ZNF684Q5T5D7 378 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 C1QTNF12Q5T7M4 302 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 KLHL24Q6TFL4 600 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 SLC16A14Q7RTX9 510 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 LINC00346Q8IVM7 164 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 ZNF679Q8IYX0 411 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 LRRC18Q8N456 261 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 RFLNBQ8N5W9 214 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 ZNF485Q8NCK3 441 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 OR1K1Q8NGR3 316 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 MROQ9BYG7 248 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 OPN3Q9H1Y3 402 aaPredicted RBP12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 TRIM36Q9NQ86 728 aa12.75□□□□□ -0.37
NIPAL3-202ENST00000339255 B8ZZF3 427 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 ZNF254O75437 659 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 SEC14L2O76054 403 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 PSKH1P11801 424 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 IGHV1-2P23083 117 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 HIST1H3AP68431 136 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 ACSM1Q08AH1 577 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 MRPL49Q13405 166 aaKnown RBP12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 SYT6Q5T7P8 510 aaPredicted RBP12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 HIST2H3PS2Q5TEC6 136 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 OR2G6Q5TZ20 316 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 C9orf135Q5VTT2 229 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 CORO6Q6QEF8 472 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 HIST2H3AQ71DI3 136 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 SSX6Q7RTT6 188 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 C17orf78Q8N4C9 275 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 ZNF433Q8N7K0 673 aaPredicted RBP12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 ZNF610Q8N9Z0 462 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 RNF133Q8WVZ7 376 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 C4orf36Q96KX1 117 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 OR8B4Q96RC9 309 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 NIPAL2Q9H841 368 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 ISYNA1Q9NPH2 558 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 IKZF2Q9UKS7 526 aa12.74□□□□□ -0.37
NIPAL3-202ENST00000339255 METTL15A6NJ78 407 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 ZNF878C9JN71 531 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 LCKP06239 509 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 HOXB1P14653 301 aaPredicted RBP12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 PSMB9P28065 219 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 HOXC12P31275 282 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 ALDH3B2P48448 385 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 ECH1Q13011 328 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 TIGD6Q17RP2 521 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 OTPQ5XKR4 325 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 KRT77Q7Z794 578 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 SKA3Q8IX90 412 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 HTRA1Q92743 480 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 BCL2L2Q92843 193 aaPredicted RBP12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 SLAMF6Q96DU3 332 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 FBXO17Q96EF6 278 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 MAP6Q96JE9 813 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 OR5M11Q96RB7 305 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 MGLLQ99685 303 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 SH3GL3Q99963 347 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 HDHD5Q9BXW7 423 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 HDHD2Q9H0R4 259 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 DDX28Q9NUL7 540 aaKnown RBP12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 ATPIF1Q9UII2 106 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 GNG8Q9UK08 70 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 TIMM10BQ9Y5J6 103 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 CIB4A0PJX0 185 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 A8MXE2 369 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 EEF1E1-BLOC1S5C9J1V9 151 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 J3QLW9 94 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 EEF1E1O43324 174 aaKnown RBP12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 UBL3O95164 117 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 ZNF19P17023 458 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 DCTDP32321 178 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 ARR3P36575 388 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 OPRL1P41146 370 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 RIDAP52758 137 aaKnown RBP12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 FOXG1P55316 489 aaPredicted RBP12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 OR12D2P58182 307 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 MLLT11Q13015 90 aaPredicted RBP12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 RAB35Q15286 201 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 CCDC58Q4VC31 144 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 TP53I3Q53FA7 332 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 CFAP77Q6ZQR2 320 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 VASH1Q7L8A9 365 aaPredicted RBP12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 YIPF7Q8N8F6 280 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 SPRYD4Q8WW59 207 aaPredicted RBP12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 GATAD2BQ8WXI9 593 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 BBC3Q96PG8 261 aaPredicted RBP12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 AMELYQ99218 206 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 USB1Q9BQ65 265 aaKnown RBP12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 MOV10Q9HCE1 1003 aaKnown RBP12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 OBP2BQ9NPH6 170 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 BABAM2Q9NXR7 383 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 ELOVL5Q9NYP7 299 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 COQ3Q9NZJ6 369 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 JKAMPQ9P055 326 aa12.73□□□□□ -0.37
NIPAL3-202ENST00000339255 A0A096LPE4 126 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms