RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 OR2AK2Q8NG84 335 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 OR2G2Q8NGZ5 317 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 SPACA5Q96QH8 159 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 NIPSNAP3BQ9BS92 247 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 CYSLTR2Q9NS75 346 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 PURGQ9UJV8 347 aaKnown RBP12.53□□□□□ -0.4
RTN4-202ENST00000337526 ING1Q9UK53 422 aaPredicted RBP12.53□□□□□ -0.4
RTN4-202ENST00000337526 SCN7AQ01118 1682 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 A0A0A6YYD5 115 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 A0A1B0GUH1 482 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 RNF212BA8MTL3 300 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 ATP6V1G2-DDX39BF2Z307 99 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 ZNF133P52736 654 aaPredicted RBP12.53□□□□□ -0.4
RTN4-202ENST00000337526 RAE1P78406 368 aaKnown RBP12.53□□□□□ -0.4
RTN4-202ENST00000337526 GRAMD2AQ8IUY3 354 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 SIRT6Q8N6T7 355 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 TMED6Q8WW62 240 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 ELSPBP1Q96BH3 223 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 NKX3-1Q99801 234 aaPredicted RBP12.53□□□□□ -0.4
RTN4-202ENST00000337526 RNF32Q9H0A6 362 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 SLC39A9Q9NUM3 307 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 TNRC6CQ9HCJ0 1690 aaKnown RBP12.52□□□□□ -0.4
RTN4-202ENST00000337526 SHOXO15266 292 aa12.52□□□□□ -0.4
RTN4-202ENST00000337526 EGR3Q06889 387 aa12.52□□□□□ -0.4
RTN4-202ENST00000337526 OR52W1Q6IF63 320 aa12.52□□□□□ -0.4
RTN4-202ENST00000337526 TAF9BQ9HBM6 251 aa12.52□□□□□ -0.4
RTN4-202ENST00000337526 CHST11Q9NPF2 352 aa12.52□□□□□ -0.4
RTN4-202ENST00000337526 NECAP2Q9NVZ3 263 aa12.52□□□□□ -0.4
RTN4-202ENST00000337526 HAO2Q9NYQ3 351 aa12.52□□□□□ -0.4
RTN4-202ENST00000337526 TBX21Q9UL17 535 aa12.52□□□□□ -0.4
RTN4-202ENST00000337526 CABIN1Q9Y6J0 2220 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 MN1Q10571 1320 aaPredicted RBP12.52□□□□□ -0.41
RTN4-202ENST00000337526 SNRPGP15A8MWD9 76 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 IDSB3KWA1 339 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 CBR1P16152 277 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 PSMB6P28072 239 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 MZT1Q08AG7 82 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 RNLSQ5VYX0 342 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 OTPQ5XKR4 325 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 LHX8Q68G74 356 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 ADAM5Q6NVV9 412 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 RBMS3Q6XE24 437 aaKnown RBP12.52□□□□□ -0.41
RTN4-202ENST00000337526 ANKRD9Q96BM1 317 aaPredicted RBP12.52□□□□□ -0.41
RTN4-202ENST00000337526 LAT2Q9GZY6 243 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 CALHM2Q9HA72 323 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 EXOSC3Q9NQT5 275 aaKnown RBP12.52□□□□□ -0.41
RTN4-202ENST00000337526 GNG12Q9UBI6 72 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 KCNG2Q9UJ96 466 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 CSAG2Q9Y5P2 127 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 ST8SIA3O43173 380 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 EN2P19622 333 aaPredicted RBP12.52□□□□□ -0.41
RTN4-202ENST00000337526 KITLGP21583 273 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 HMGA2P52926 109 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 METAP1P53582 386 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 LTC4SQ16873 150 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 RNF165Q6ZSG1 346 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 RPS19BP1Q86WX3 136 aaKnown RBP12.52□□□□□ -0.41
RTN4-202ENST00000337526 TCTE3Q8IZS6 198 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 MFSD4AQ8N468 514 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 NUDCD2Q8WVJ2 157 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 MRPL38Q96DV4 380 aaKnown RBP12.52□□□□□ -0.41
RTN4-202ENST00000337526 TEX101Q9BY14 249 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 PARP12Q9H0J9 701 aaKnown RBP12.52□□□□□ -0.41
RTN4-202ENST00000337526 PRDM7Q9NQW5 492 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 MPPED1O15442 326 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 CASP6P55212 293 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 BATFQ16520 125 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 TMEM240Q5SV17 173 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 MAML2Q8IZL2 1156 aaPredicted RBP12.52□□□□□ -0.41
RTN4-202ENST00000337526 GPR32P1Q8NGA4 272 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 OR51A4Q8NGJ6 313 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 ST8SIA4Q92187 359 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 EDAQ92838 391 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 TSLPQ969D9 159 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 ZNF629Q9UEG4 869 aaPredicted RBP12.52□□□□□ -0.41
RTN4-202ENST00000337526 KCND3Q9UK17 655 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 PADI1Q9ULC6 663 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 PPIL1Q9Y3C6 166 aa12.52□□□□□ -0.41
RTN4-202ENST00000337526 CDK5RAP2Q96SN8 1893 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 DOCK2Q92608 1830 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 KCNE1BA0A087WTH5 132 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 RAB19A4D1S5 217 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 PRSS37A4D1T9 235 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 SCGB2A1O75556 95 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 CER1O95813 267 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 CLDN1O95832 211 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 F10P00742 488 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 CD46P15529 392 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 CPEB2Q7Z5Q1 589 aaKnown RBP12.51□□□□□ -0.41
RTN4-202ENST00000337526 RELL2Q8NC24 303 aaPredicted RBP12.51□□□□□ -0.41
RTN4-202ENST00000337526 OR4Q3Q8NH05 313 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 SAMD10Q9BYL1 202 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 BCO1Q9HAY6 547 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 ANKRD10Q9NXR5 420 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 MYOTQ9UBF9 498 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 MMP17Q9ULZ9 603 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 TRAV1-2A0A0B4J238 106 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 GABRA2P47869 451 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 SLC17A1Q14916 467 aa12.51□□□□□ -0.41
RTN4-202ENST00000337526 DCAF12Q5T6F0 453 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms